RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 NEUROD6Q96NK8 337 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 KRT23Q9C075 422 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 THEGQ9P2T0 379 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 DNAJC13O75165 2243 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 HCLS1P14317 486 aaPredicted RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 CBX1P83916 185 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 PLCB1Q9NQ66 1216 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 MAPKBP1O60336 1514 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 ANKRD62A6NC57 917 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 CHMP4BP1P59074 171 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 SEPT2Q15019 361 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 VCX3AQ9NNX9 186 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 ANAPC4Q9UJX5 808 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 KIF1CO43896 1103 aaKnown RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 HLTFQ14527 1009 aaKnown RBP eCLIP7.46□□□□□ -1.224e-7■■■■■ 26.9
VPS13B-202ENST00000357162 RNASELQ05823 741 aaKnown RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 MAP3K12Q12852 859 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 CATIPQ7Z7H3 387 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 NAP1L4Q99733 375 aaKnown RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 N4BP3O15049 544 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 IQCA1Q86XH1 822 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 TBC1D5Q92609 795 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 SEC62Q99442 399 aaKnown RBP7.46□□□□□ -1.22
VPS13B-202ENST00000357162 PLXNC1O60486 1568 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 RTEL1-TNFRSF6BF6WH68 1400 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 PPP1R9BQ96SB3 815 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 TANGO6Q9C0B7 1094 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 SLC12A7Q9Y666 1083 aa7.46□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC6Q16204 474 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 RNF187Q5TA31 235 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC26Q8TAB7 109 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 MPHOSPH10O00566 681 aaKnown RBP7.45□□□□□ -1.22
VPS13B-202ENST00000357162 GNAT2P19087 354 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 INPP5BP32019 993 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 DOPEY2Q9Y3R5 2298 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 SBNO2Q9Y2G9 1366 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 HOXB7P09629 217 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 ADGRL1O94910 1474 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 PHLDB3Q6NSJ2 640 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 MSANTD4Q8NCY6 345 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC14Q49A88 953 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 RABGAP1Q9Y3P9 1069 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 ZNF622Q969S3 477 aaKnown RBP eCLIP7.45□□□□□ -1.229e-7■■■□□ 17.7
VPS13B-202ENST00000357162 IQCGQ9H095 443 aaKnown RBP7.45□□□□□ -1.22
VPS13B-202ENST00000357162 DUOX2Q9NRD8 1548 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 POLR1AO95602 1720 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-202ENST00000357162 GABPB2Q8TAK5 448 aaPredicted RBP7.45□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC114Q96M63 670 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 TRAPPC8Q9Y2L5 1435 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 TTC39AQ5SRH9 613 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 RABGGTAQ92696 567 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 NUP58Q9BVL2 599 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 RSPH14Q9UHP6 348 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 POGZQ7Z3K3 1410 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA8BA8MQT2 603 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 MAATS1Q7Z4T9 603 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 MRFAP1L1Q96HT8 127 aa7.45□□□□□ -1.22
VPS13B-202ENST00000357162 PODNQ7Z5L7 613 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 RUNDC3BQ96NL0 473 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 TAOK1Q7L7X3 1001 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 SYCE1Q8N0S2 351 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC194A0A1B0GVG4 234 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 EIF3DO15371 548 aaKnown RBP eCLIP7.44□□□□□ -1.223e-6■■□□□ 13.7
VPS13B-202ENST00000357162 TMTC1Q8IUR5 882 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 ZNF330Q9Y3S2 320 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 MINK1Q8N4C8 1332 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 MRC2Q9UBG0 1479 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 KDM4AO75164 1064 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 TCOF1Q13428 1488 aaKnown RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 BLMP54132 1417 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CALM1P0DP23 149 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CALM2P0DP24 149 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CALM3P0DP25 149 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 EIF2S2P20042 333 aaKnown RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.44□□□□□ -1.221e-6■■■■■ 33.1
VPS13B-202ENST00000357162 CIB2O75838 187 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 BRPF1P55201 1214 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 PSME1Q06323 249 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 STMN2Q93045 179 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 ELL2O00472 640 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 DNAJC8O75937 253 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 SPTY2D1Q68D10 685 aaPredicted RBP7.44□□□□□ -1.22
VPS13B-202ENST00000357162 EFCAB8A8MWE9 144 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 BCAR3O75815 825 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 SSFA2P28290 1259 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 HSP90AA5PQ58FG0 334 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 RAI14Q9P0K7 980 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 RNF14Q9UBS8 474 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 RTL1A6NKG5 1358 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 CWC27Q6UX04 472 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms