RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SPEF2Q9C093 1822 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 A0A1B0GUL7 405 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 DBNDD2Q9BQY9 259 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 TRIM6-TRIM34B2RNG4 842 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 CDC45O75419 566 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 MMP10P09238 476 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 MSL1Q68DK7 614 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 VGLL2Q8N8G2 317 aa19.07■□□□□ 0.64
CTSA-202ENST00000354880 RBM19Q9Y4C8 960 aaKnown RBP19.07■□□□□ 0.64
CTSA-202ENST00000354880 TAF1P21675 1872 aa19.06■□□□□ 0.64
CTSA-202ENST00000354880 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
CTSA-202ENST00000354880 COL4A1P02462 1669 aa19.06■□□□□ 0.64
CTSA-202ENST00000354880 PDE8BO95263 885 aa19.06■□□□□ 0.64
CTSA-202ENST00000354880 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
CTSA-202ENST00000354880 PARP3Q9Y6F1 533 aa19.06■□□□□ 0.64
CTSA-202ENST00000354880 CELF1Q92879 486 aaKnown RBP19.05■□□□□ 0.64
CTSA-202ENST00000354880 BSDC1Q9NW68 430 aaPredicted RBP19.05■□□□□ 0.64
CTSA-202ENST00000354880 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
CTSA-202ENST00000354880 TBC1D9Q6ZT07 1266 aa19.04■□□□□ 0.64
CTSA-202ENST00000354880 RILPL2Q969X0 211 aa19.04■□□□□ 0.64
CTSA-202ENST00000354880 SEC24BO95487 1268 aa19.04■□□□□ 0.64
CTSA-202ENST00000354880 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
CTSA-202ENST00000354880 CRY2Q49AN0 593 aa19.04■□□□□ 0.64
CTSA-202ENST00000354880 ATP5JP18859 108 aa19.03■□□□□ 0.64
CTSA-202ENST00000354880 PUM3Q15397 648 aaKnown RBP19.03■□□□□ 0.64
CTSA-202ENST00000354880 CNTROBQ8N137 903 aa19.03■□□□□ 0.64
CTSA-202ENST00000354880 HELBQ8NG08 1087 aaPredicted RBP19.03■□□□□ 0.64
CTSA-202ENST00000354880 MAP4K4O95819 1239 aaPredicted RBP19.02■□□□□ 0.64
CTSA-202ENST00000354880 CHRNDQ07001 517 aa19.02■□□□□ 0.64
CTSA-202ENST00000354880 RPGRQ92834 1020 aaKnown RBP19.02■□□□□ 0.64
CTSA-202ENST00000354880 XAGE2Q96GT9 111 aa19.02■□□□□ 0.64
CTSA-202ENST00000354880 BOLA2Q9H3K6 86 aa19.02■□□□□ 0.64
CTSA-202ENST00000354880 AK9Q5TCS8 1911 aa19.02■□□□□ 0.64
CTSA-202ENST00000354880 KLRG2A4D1S0 409 aaPredicted RBP19.02■□□□□ 0.63
CTSA-202ENST00000354880 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.63
CTSA-202ENST00000354880 TAF5LO75529 589 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 FGFR2P21802 821 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 GRAPQ13588 217 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 GORABQ5T7V8 394 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 CASC1Q6TDU7 716 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
CTSA-202ENST00000354880 LPIN2Q92539 896 aa19.01■□□□□ 0.63
CTSA-202ENST00000354880 ADORA1P30542 326 aa19■□□□□ 0.63
CTSA-202ENST00000354880 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
CTSA-202ENST00000354880 UPF1Q92900 1129 aaKnown RBP eCLIP19■□□□□ 0.633e-10■■■■■ 31.9
CTSA-202ENST00000354880 PDGFDQ9GZP0 370 aaPredicted RBP19■□□□□ 0.63
CTSA-202ENST00000354880 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
CTSA-202ENST00000354880 ANKRD31Q8N7Z5 1873 aa19■□□□□ 0.63
CTSA-202ENST00000354880 EVI5LQ96CN4 794 aa19■□□□□ 0.63
CTSA-202ENST00000354880 RBM17Q96I25 401 aaKnown RBP19■□□□□ 0.63
CTSA-202ENST00000354880 SLC5A1P13866 664 aa18.99■□□□□ 0.63
CTSA-202ENST00000354880 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
CTSA-202ENST00000354880 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
CTSA-202ENST00000354880 A0A1B0GUL6 1792 aa18.98■□□□□ 0.63
CTSA-202ENST00000354880 HOXA10P31260 410 aaPredicted RBP18.98■□□□□ 0.63
CTSA-202ENST00000354880 HAUS7Q99871 368 aa18.98■□□□□ 0.63
CTSA-202ENST00000354880 EIF5BO60841 1220 aaKnown RBP18.97■□□□□ 0.63
CTSA-202ENST00000354880 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
CTSA-202ENST00000354880 PDE6BP35913 854 aa18.97■□□□□ 0.63
CTSA-202ENST00000354880 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
CTSA-202ENST00000354880 TTC39AQ5SRH9 613 aa18.97■□□□□ 0.63
CTSA-202ENST00000354880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.97■□□□□ 0.63
CTSA-202ENST00000354880 ARAP2Q8WZ64 1704 aa18.97■□□□□ 0.63
CTSA-202ENST00000354880 SNAP23O00161 211 aa18.97■□□□□ 0.63
CTSA-202ENST00000354880 CHMLP26374 656 aa18.97■□□□□ 0.63
CTSA-202ENST00000354880 UBE4AQ14139 1066 aa18.96■□□□□ 0.63
CTSA-202ENST00000354880 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
CTSA-202ENST00000354880 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
CTSA-202ENST00000354880 ANKRD2Q9GZV1 360 aa18.96■□□□□ 0.63
CTSA-202ENST00000354880 SRGNP10124 158 aa18.95■□□□□ 0.62
CTSA-202ENST00000354880 ZNF512BQ96KM6 892 aaPredicted RBP18.95■□□□□ 0.62
CTSA-202ENST00000354880 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
CTSA-202ENST00000354880 BBOX1O75936 387 aa18.94■□□□□ 0.62
CTSA-202ENST00000354880 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
CTSA-202ENST00000354880 EDC3Q96F86 508 aaKnown RBP18.94■□□□□ 0.62
CTSA-202ENST00000354880 NPR1P16066 1061 aa18.93■□□□□ 0.62
CTSA-202ENST00000354880 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
CTSA-202ENST00000354880 PHKA1P46020 1223 aa18.93■□□□□ 0.62
CTSA-202ENST00000354880 ESYT1Q9BSJ8 1104 aa18.93■□□□□ 0.62
CTSA-202ENST00000354880 FSD1Q9BTV5 496 aa18.93■□□□□ 0.62
CTSA-202ENST00000354880 HIP1O00291 1037 aa18.92■□□□□ 0.62
CTSA-202ENST00000354880 UQCRFS1P1P0C7P4 283 aa18.92■□□□□ 0.62
CTSA-202ENST00000354880 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
CTSA-202ENST00000354880 KCNJ4P48050 445 aa18.92■□□□□ 0.62
CTSA-202ENST00000354880 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
CTSA-202ENST00000354880 GOLIM4O00461 696 aa18.91■□□□□ 0.62
CTSA-202ENST00000354880 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
CTSA-202ENST00000354880 SCARF1Q14162 830 aa18.91■□□□□ 0.62
CTSA-202ENST00000354880 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
CTSA-202ENST00000354880 DIAPH3Q9NSV4 1193 aa18.91■□□□□ 0.62
CTSA-202ENST00000354880 ANKIB1Q9P2G1 1089 aa18.91■□□□□ 0.62
CTSA-202ENST00000354880 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
CTSA-202ENST00000354880 WTIPA6NIX2 430 aaPredicted RBP18.9■□□□□ 0.62
CTSA-202ENST00000354880 ALDH1B1P30837 517 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 MCAMP43121 646 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 H0YIN7 160 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 REC8O95072 547 aa18.9■□□□□ 0.62
CTSA-202ENST00000354880 BCAMP50895 628 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms