RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 SPTLC2O15270 562 aa7.42□□□□□ -1.22
TTC3-201ENST00000354749 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
TTC3-201ENST00000354749 DNM1Q05193 864 aaKnown RBP7.42□□□□□ -1.22
TTC3-201ENST00000354749 BRAPQ7Z569 592 aa7.42□□□□□ -1.22
TTC3-201ENST00000354749 THOC2Q8NI27 1593 aaKnown RBP7.42□□□□□ -1.22
TTC3-201ENST00000354749 ATP2C2O75185 946 aa7.42□□□□□ -1.22
TTC3-201ENST00000354749 TMTC2Q8N394 836 aa7.42□□□□□ -1.22
TTC3-201ENST00000354749 SMC6Q96SB8 1091 aa7.42□□□□□ -1.22
TTC3-201ENST00000354749 TRMT112Q9UI30 125 aaKnown RBP7.42□□□□□ -1.22
TTC3-201ENST00000354749 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 VAV2P52735 878 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 UBE3BQ7Z3V4 1068 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 RSRC1Q96IZ7 334 aaKnown RBP7.41□□□□□ -1.22
TTC3-201ENST00000354749 BICDL2A1A5D9 508 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 TERF1P54274 439 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 GABPB1Q06547 395 aaPredicted RBP7.41□□□□□ -1.22
TTC3-201ENST00000354749 ANKLE2Q86XL3 938 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 VPS18Q9P253 973 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 ZBTB43O43298 467 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 KIF5AQ12840 1032 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 ERO1AQ96HE7 468 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 CWC25Q9NXE8 425 aaPredicted RBP7.41□□□□□ -1.22
TTC3-201ENST00000354749 MAPKBP1O60336 1514 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 WTAPQ15007 396 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 PTGS1P23219 599 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 CEP57Q86XR8 500 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 PCDHB15Q9Y5E8 787 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 NESP48681 1621 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 RTL9Q8NET4 1388 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 WASLO00401 505 aaPredicted RBP7.41□□□□□ -1.22
TTC3-201ENST00000354749 ALDH1L1O75891 902 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 HAND2P61296 217 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 CCDC42Q96M95 316 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 TSGA10Q9BZW7 698 aa7.41□□□□□ -1.22
TTC3-201ENST00000354749 ADGRL1O94910 1474 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 UQCRFS1P1P0C7P4 283 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 TNNC1P63316 161 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 CCDC174Q6PII3 467 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 POLR3AO14802 1390 aaPredicted RBP7.4□□□□□ -1.22
TTC3-201ENST00000354749 NOS1P29475 1434 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 A6NNZ2 444 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 ALG1Q9BT22 464 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.4□□□□□ -1.22
TTC3-201ENST00000354749 CC2D2AQ9P2K1 1620 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 PRC1O43663 620 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 RBM8AQ9Y5S9 174 aaKnown RBP7.4□□□□□ -1.22
TTC3-201ENST00000354749 TUBB2AQ13885 445 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 CCDC144CPQ8IYA2 1237 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 SYCP3Q8IZU3 236 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 NECAB1Q8N987 351 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 ESR2Q92731 530 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 FERMT2Q96AC1 680 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 DRC1Q96MC2 740 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 TUBB2BQ9BVA1 445 aa7.4□□□□□ -1.22
TTC3-201ENST00000354749 A0A1B0GUL7 405 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 BAG3O95817 575 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 ASIC1P78348 528 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 MPRIPQ6WCQ1 1025 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 TRIM75PA6NK02 468 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 SETDB1Q15047 1291 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 GBP6Q6ZN66 633 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 FMNL3Q8IVF7 1028 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 AFMP43652 599 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 RTN1Q16799 776 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 OTUD6BQ8N6M0 293 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 TEX13AQ9BXU3 409 aaPredicted RBP7.4□□□□□ -1.23
TTC3-201ENST00000354749 PIK3C2GO75747 1445 aa7.4□□□□□ -1.23
TTC3-201ENST00000354749 ZPR1O75312 459 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 LDHCP07864 332 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 LMOD1P29536 600 aaPredicted RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 MXRA7P84157 204 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 CCDC114Q96M63 670 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 PI4KAP2A4QPH2 592 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 PI4KAP1Q8N8J0 262 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 GSTO1P78417 241 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 CRNKL1Q9BZJ0 848 aaKnown RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 GUCA1BQ9UMX6 200 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 SOS1Q07889 1333 aaPredicted RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 KRT13P13646 458 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 MCMDC2Q4G0Z9 681 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 Q6ZUG5 572 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 B4GALNT4Q76KP1 1039 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 POTEDQ86YR6 584 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 CEP83Q9Y592 693 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 TSPY2A6NKD2 308 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 UBXN1Q04323 297 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 MTRF1LQ9UGC7 380 aaKnown RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 PTCD1O75127 700 aaKnown RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 CPLX4Q7Z7G2 160 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 CDC5LQ99459 802 aaKnown RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 ADGRF5Q8IZF2 1346 aa7.39□□□□□ -1.23
TTC3-201ENST00000354749 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
TTC3-201ENST00000354749 CCDC97Q96F63 343 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms