RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FAM126AQ9BYI3 521 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-202ENST00000354071 EFR3BQ9Y2G0 817 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 KCNMB2Q9Y691 235 aa2.39□□□□□ -2.03
BRCA1-202ENST00000354071 CPNE3O75131 537 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SLURP2P0DP57 97 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 GRM2Q14416 872 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 C4orf17Q53FE4 359 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 CMTR1Q8N1G2 835 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 GPRASP2Q96D09 838 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 EAF1Q96JC9 268 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 GINM1Q9NU53 330 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 USP31Q70CQ4 1352 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 METTL12A8MUP2 240 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 IDH3AP50213 366 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SERINC3Q13530 473 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 TEAD4Q15561 434 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 DBN1Q16643 649 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 PEAR1Q5VY43 1037 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 FBXL19Q6PCT2 694 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 RPUSD2Q8IZ73 545 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 C3orf58Q8NDZ4 430 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 STAG1Q8WVM7 1258 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 RNPC3Q96LT9 517 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 HHIPQ96QV1 700 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 INSM2Q96T92 566 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 CRISPLD1Q9H336 500 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 PPT2Q9UMR5 302 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 WDR4P57081 412 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 PTPN12Q05209 780 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 TAF1CQ15572 869 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 WDR44Q5JSH3 913 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 GLIS3Q8NEA6 775 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SUSD3Q96L08 255 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SLC52A1Q9NWF4 448 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 NLRP2Q9NX02 1062 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 WIPF1O43516 503 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 STK10O94804 968 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 PARNO95453 639 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 CELA3AP09093 270 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SEPT6Q14141 434 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SCARF1Q14162 830 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 ZNF438Q7Z4V0 828 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 FBXO27Q8NI29 283 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 ZNF775Q96BV0 537 aaPredicted RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 ANAPC16Q96DE5 110 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 ST7Q9NRC1 585 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SPG7Q9UQ90 795 aa2.38□□□□□ -2.03
BRCA1-202ENST00000354071 RTCBQ9Y3I0 505 aaKnown RBP2.38□□□□□ -2.03
BRCA1-202ENST00000354071 SNAPC4Q5SXM2 1469 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 GNL2Q13823 731 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 RASIP1Q5U651 963 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 NBPF10Q6P3W6 841 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 LRRC69Q6ZNQ3 347 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ANKS3Q6ZW76 656 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 KRT25Q7Z3Z0 450 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 NBPF15Q8N660 670 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 SPON2Q9BUD6 331 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 SNTG2Q9NY99 539 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 FAM187AA6NFU0 413 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 PAGE1O75459 146 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 INPP5BP32019 993 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 EVA1CP58658 441 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 PTSQ03393 145 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 PTPROQ16827 1216 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ESCO1Q5FWF5 840 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 RAVER1Q8IY67 606 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 SRPK1Q96SB4 655 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ZSCAN10Q96SZ4 725 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ELP3Q9H9T3 547 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 CAPN5O15484 640 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 RASA3Q14644 834 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 TKFCQ3LXA3 575 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 TMEM214Q6NUQ4 689 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 LILRB2Q8N423 598 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 RHPN1Q8TCX5 695 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 FBF1Q8TES7 1133 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ZCCHC2Q9C0B9 1178 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 ZFYVE28Q9HCC9 887 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 STRN4Q9NRL3 753 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 IFT57Q9NWB7 429 aa2.37□□□□□ -2.03
BRCA1-202ENST00000354071 G3BP2Q9UN86 482 aaKnown RBP2.37□□□□□ -2.03
BRCA1-202ENST00000354071 UBAP1LF5GYI3 381 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 GADD45BO75293 160 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 USP5P45974 858 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 ZNF157P51786 506 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 FCGRTP55899 365 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 C21orf62-AS1Q17RA5 79 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 TPTE2Q6XPS3 522 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 PRICKLE2Q7Z3G6 844 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 RAB44Q7Z6P3 723 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 FILIP1Q7Z7B0 1213 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 TTF2Q9UNY4 1162 aaKnown RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 PHACTR2O75167 634 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 RHOQP17081 205 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 KCNQ4P56696 695 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 CCDC85BQ15834 202 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 COL13A1Q5TAT6 717 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 NOL8Q76FK4 1167 aaKnown RBP2.36□□□□□ -2.03
BRCA1-202ENST00000354071 NPAS3Q8IXF0 933 aa2.36□□□□□ -2.03
BRCA1-202ENST00000354071 CYP4X1Q8N118 509 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms