RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
SMTN-202ENST00000347557 KRT32Q14532 448 aa17.17■□□□□ 0.34
SMTN-202ENST00000347557 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
SMTN-202ENST00000347557 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
SMTN-202ENST00000347557 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
SMTN-202ENST00000347557 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
SMTN-202ENST00000347557 SCRN1Q12765 414 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
SMTN-202ENST00000347557 BECN2A8MW95 431 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 TPM3P06753 285 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 CCDC94Q9BW85 323 aaPredicted RBP17.16■□□□□ 0.34
SMTN-202ENST00000347557 COL15A1P39059 1388 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 ZNF75DP51815 510 aa17.16■□□□□ 0.34
SMTN-202ENST00000347557 TPD52L1Q16890 204 aaPredicted RBP17.16■□□□□ 0.34
SMTN-202ENST00000347557 CCAR1Q8IX12 1150 aaKnown RBP17.16■□□□□ 0.34
SMTN-202ENST00000347557 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 ELP1O95163 1332 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 ATP5JP18859 108 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 ME1P48163 572 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 SLC52A2Q9HAB3 445 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
SMTN-202ENST00000347557 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
SMTN-202ENST00000347557 DMTNQ08495 405 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 ARID5BQ14865 1188 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 PDCL2Q8N4E4 241 aa17.15■□□□□ 0.34
SMTN-202ENST00000347557 STOX1Q6ZVD7 989 aa17.14■□□□□ 0.34
SMTN-202ENST00000347557 SNRKQ9NRH2 765 aa17.14■□□□□ 0.34
SMTN-202ENST00000347557 VGLL3A8MV65 326 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
SMTN-202ENST00000347557 RESTQ13127 1097 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 ZNF594Q96JF6 807 aaPredicted RBP17.14■□□□□ 0.33
SMTN-202ENST00000347557 CFAP45Q9UL16 551 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 TNNT1P13805 278 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 HAND2P61296 217 aa17.14■□□□□ 0.33
SMTN-202ENST00000347557 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 C11orf57Q6ZUT1 292 aaPredicted RBP17.13■□□□□ 0.33
SMTN-202ENST00000347557 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMTN-202ENST00000347557 NAA30Q147X3 362 aaPredicted RBP17.13■□□□□ 0.33
SMTN-202ENST00000347557 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 LTN1O94822 1766 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 RGPD2P0DJD1 1756 aa17.13■□□□□ 0.33
SMTN-202ENST00000347557 ZNF609O15014 1411 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 CCDC144BQ3MJ40 725 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
SMTN-202ENST00000347557 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
SMTN-202ENST00000347557 UTYO14607 1347 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 SLIT1O75093 1534 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 IGSF3O75054 1194 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
SMTN-202ENST00000347557 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■■□□ 15.4
SMTN-202ENST00000347557 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
SMTN-202ENST00000347557 KINO60870 393 aaKnown RBP17.12■□□□□ 0.33
SMTN-202ENST00000347557 CABP4P57796 275 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 USP28Q96RU2 1077 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 ZBTB3Q9H5J0 574 aa17.12■□□□□ 0.33
SMTN-202ENST00000347557 PROSER2Q86WR7 435 aaPredicted RBP17.11■□□□□ 0.33
SMTN-202ENST00000347557 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
SMTN-202ENST00000347557 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
SMTN-202ENST00000347557 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
SMTN-202ENST00000347557 FSIP1Q8NA03 581 aa17.11■□□□□ 0.33
SMTN-202ENST00000347557 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
SMTN-202ENST00000347557 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 GOLPH3LQ9H4A5 285 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 PHKG2P15735 406 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 DHX32Q7L7V1 743 aaKnown RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 HAUS7Q99871 368 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 KBTBD3Q8NAB2 608 aa17.1■□□□□ 0.33
SMTN-202ENST00000347557 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMTN-202ENST00000347557 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
SMTN-202ENST00000347557 ERBB3P21860 1342 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 BIN1O00499 593 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 NPHP1O15259 732 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 ISM2Q6H9L7 571 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 TDRD7Q8NHU6 1098 aaKnown RBP17.09■□□□□ 0.33
SMTN-202ENST00000347557 NFAT5O94916 1531 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 HEG1Q9ULI3 1381 aa17.09■□□□□ 0.33
SMTN-202ENST00000347557 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.33
SMTN-202ENST00000347557 A0A1B0GVL5 298 aa17.08■□□□□ 0.32
SMTN-202ENST00000347557 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
SMTN-202ENST00000347557 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms