RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
TRIOBP-202ENST00000344404 SATB1Q01826 763 aa13.97□□□□□ -0.17
TRIOBP-202ENST00000344404 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
TRIOBP-202ENST00000344404 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
TRIOBP-202ENST00000344404 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 FCHSD2O94868 740 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 LDHCP07864 332 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 CCDC6Q16204 474 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 CCDC65Q8IXS2 484 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 NFATC2IPQ8NCF5 419 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 GEN1Q17RS7 908 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 DAAM2Q86T65 1068 aa13.96□□□□□ -0.17
TRIOBP-202ENST00000344404 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 BACH1O14867 736 aa13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 GABPAQ06546 454 aa13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 NAP1L3Q99457 506 aaPredicted RBP13.96□□□□□ -0.18
TRIOBP-202ENST00000344404 ZSCAN12O43309 604 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 GJB2P29033 226 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 GSTO1P78417 241 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 STAT6P42226 847 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 C16orf45Q96MC5 204 aaPredicted RBP13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 CRCPO75575 148 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 RNF34Q969K3 372 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 NAPAP54920 295 aa13.95□□□□□ -0.18
TRIOBP-202ENST00000344404 NAA16Q6N069 864 aaPredicted RBP13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 PDCL2Q8N4E4 241 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 PPARDQ03181 441 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 DDX39AO00148 427 aaKnown RBP13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 FAM13AO94988 1023 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 AAMPQ13685 434 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 WTAPQ15007 396 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 TCEANC2Q96MN5 208 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 MAGEB6Q8N7X4 407 aa13.94□□□□□ -0.18
TRIOBP-202ENST00000344404 KIF14Q15058 1648 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 COPS6Q7L5N1 327 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 KRT9P35527 623 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 ZBTB16Q05516 673 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 FLIIQ13045 1269 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 ORC3Q9UBD5 711 aaPredicted RBP13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 LARGE2Q8N3Y3 721 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
TRIOBP-202ENST00000344404 RBM17Q96I25 401 aaKnown RBP13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 ZKSCAN3Q9BRR0 538 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 CHMP2AO43633 222 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 MRRFQ96E11 262 aaKnown RBP13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 IMPG2Q9BZV3 1241 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 H0YIN7 160 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 MICALCLQ6ZW33 695 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 CCT6BQ92526 530 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 ERCC5P28715 1186 aaPredicted RBP13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 KMT5BQ4FZB7 885 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 SPECC1LQ69YQ0 1117 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 NACA2Q9H009 215 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
TRIOBP-202ENST00000344404 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 MYCLP12524 364 aaPredicted RBP13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 STK25O00506 426 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 KRT5P13647 590 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 MCM3P25205 808 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 TEX13AQ9BXU3 409 aaPredicted RBP13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 UFL1O94874 794 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 IL2RBP14784 551 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
TRIOBP-202ENST00000344404 TXNDC16Q9P2K2 825 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms