RNA–Protein interactions for RNA: ENST00000343067.8

EPB41-201, Transcript of erythrocyte membrane protein band 4.1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EPB41, Length 5,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-201ENST00000343067 TNIP1Q15025 636 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 TRIM55Q9BYV6 548 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 RIMBP3CA6NJZ7 1639 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 RIMBP3BA6NNM3 1639 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 RIMBP3Q9UFD9 1639 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 FSD2A1L4K1 749 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 TPD52P55327 224 aaPredicted RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 ANO1Q5XXA6 986 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 IPO5O00410 1097 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 DIAPH1O60610 1272 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 PPP1R21Q6ZMI0 780 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 FCHSD2O94868 740 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 CCDC158Q5M9N0 1113 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 ATP7BP35670 1465 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 A0A0G2JS52 829 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 HNRNPCL2B2RXH8 293 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 HNRNPCL1O60812 293 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 SERPINC1P01008 464 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 SPECC1Q5M775 1068 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 TRIM4Q9C037 500 aa9.06□□□□□ -0.96
EPB41-201ENST00000343067 MAP2P11137 1827 aaKnown RBP9.06□□□□□ -0.96
EPB41-201ENST00000343067 BUB1BO60566 1050 aaPredicted RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 SSBP05455 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
EPB41-201ENST00000343067 KRT5P13647 590 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 LMNB1P20700 586 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 TMED1Q13445 227 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 MCM6Q14566 821 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 GFM2Q969S9 779 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 LRRCC1Q9C099 1032 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 GOLGA8QA0A0J9YX86 632 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 GOLGA8OA6NCC3 632 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 GOLGA8NF8WBI6 632 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 KRT10P13645 584 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 POLR2FP61218 127 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 IQCA1Q86XH1 822 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 SMC6Q96SB8 1091 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 API5Q9BZZ5 524 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 MCM4P33991 863 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 TXLNBQ8N3L3 684 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 TANGO6Q9C0B7 1094 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 CPSF1Q10570 1443 aaKnown RBP9.05□□□□□ -0.96
EPB41-201ENST00000343067 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 GIMAP4Q9NUV9 329 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 CCDC172P0C7W6 258 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 RANBP1P43487 201 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 CDK19Q9BWU1 502 aa9.05□□□□□ -0.96
EPB41-201ENST00000343067 CAPN9O14815 690 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 STMN1P16949 149 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 FBLN1P23142 703 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 TSNAXIP1Q2TAA8 658 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 ZNF354CQ86Y25 554 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 TSKSQ9UJT2 592 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 VAMP4O75379 141 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 PSMD2Q13200 908 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 CHCHD3Q9NX63 227 aaKnown RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 ZFXP17010 805 aaPredicted RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 KIF11P52732 1056 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 NRXN3Q9Y4C0 1643 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 PEX19P40855 299 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 MRE11P49959 708 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 SIRT2Q8IXJ6 389 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 PLVAPQ9BX97 442 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 POLE3Q9NRF9 147 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 C6orf203Q9P0P8 240 aaPredicted RBP9.04□□□□□ -0.96
EPB41-201ENST00000343067 DSEQ9UL01 958 aa9.04□□□□□ -0.96
EPB41-201ENST00000343067 SPECC1L-ADORA2AF8WAN1 911 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 DLG5Q8TDM6 1919 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 BIRC3Q13489 604 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 FILIP1Q7Z7B0 1213 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 OMA1Q96E52 524 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 NOL10Q9BSC4 688 aaKnown RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 A2ML1A8K2U0 1454 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 NOL3O60936 208 aaKnown RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 PROCA1Q8NCQ7 364 aaPredicted RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 CRACR2AQ9BSW2 395 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 KNDC1Q76NI1 1749 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 MAP2K1Q02750 393 aaPredicted RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 MRPL50Q8N5N7 158 aaKnown RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 ARHGAP45Q92619 1136 aa9.03□□□□□ -0.96
EPB41-201ENST00000343067 LTV1Q96GA3 475 aaPredicted RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 ZNF830Q96NB3 372 aaPredicted RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 LUC7LQ9NQ29 371 aaKnown RBP9.03□□□□□ -0.96
EPB41-201ENST00000343067 ABCC4O15439 1325 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms