RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 VEGFBP49765 207 aa19.55■□□□□ 0.72
VAPA-201ENST00000340541 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
VAPA-201ENST00000340541 DEFB115Q30KQ5 88 aa19.55■□□□□ 0.72
VAPA-201ENST00000340541 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
VAPA-201ENST00000340541 MPNDQ8N594 471 aa19.55■□□□□ 0.72
VAPA-201ENST00000340541 CCDC85AQ96PX6 553 aaPredicted RBP19.55■□□□□ 0.72
VAPA-201ENST00000340541 AOC3Q16853 763 aa19.54■□□□□ 0.72
VAPA-201ENST00000340541 PRDM10Q9NQV6 1147 aa19.54■□□□□ 0.72
VAPA-201ENST00000340541 SMC4Q9NTJ3 1288 aa19.54■□□□□ 0.72
VAPA-201ENST00000340541 RTL9Q8NET4 1388 aa19.54■□□□□ 0.72
VAPA-201ENST00000340541 ALDH1L1O75891 902 aa19.53■□□□□ 0.72
VAPA-201ENST00000340541 BRPF1P55201 1214 aaPredicted RBP19.53■□□□□ 0.72
VAPA-201ENST00000340541 KIAA2012Q0VF49 1180 aa19.53■□□□□ 0.72
VAPA-201ENST00000340541 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
VAPA-201ENST00000340541 GREM2Q9H772 168 aa19.53■□□□□ 0.72
VAPA-201ENST00000340541 ADARB2Q9NS39 739 aaKnown RBP19.53■□□□□ 0.72
VAPA-201ENST00000340541 GPRC5DQ9NZD1 345 aa19.53■□□□□ 0.72
VAPA-201ENST00000340541 ZBED9Q6R2W3 1325 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 CSF1RP07333 972 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
VAPA-201ENST00000340541 CXCL9Q07325 125 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 TNIP1Q15025 636 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 AIDAQ96BJ3 306 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 WBP1LQ9NX94 342 aa19.52■□□□□ 0.72
VAPA-201ENST00000340541 GRM8O00222 908 aa19.51■□□□□ 0.71
VAPA-201ENST00000340541 CTCFP49711 727 aaPredicted RBP19.51■□□□□ 0.71
VAPA-201ENST00000340541 FOXN1O15353 648 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 GPSM2P81274 684 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 FOXO4P98177 505 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 CIAPIN1Q6FI81 312 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 PGAP2Q9UHJ9 254 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 SPEF2Q9C093 1822 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 UTYO14607 1347 aa19.5■□□□□ 0.71
VAPA-201ENST00000340541 MAP2K1Q02750 393 aaPredicted RBP19.49■□□□□ 0.71
VAPA-201ENST00000340541 EPHA10Q5JZY3 1008 aa19.49■□□□□ 0.71
VAPA-201ENST00000340541 ZC3H15Q8WU90 426 aaKnown RBP19.49■□□□□ 0.71
VAPA-201ENST00000340541 ABT1Q9ULW3 272 aaKnown RBP19.49■□□□□ 0.71
VAPA-201ENST00000340541 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
VAPA-201ENST00000340541 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
VAPA-201ENST00000340541 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
VAPA-201ENST00000340541 ANKRD18AQ8IVF6 992 aa19.48■□□□□ 0.71
VAPA-201ENST00000340541 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
VAPA-201ENST00000340541 NSFL1CQ9UNZ2 370 aaKnown RBP19.48■□□□□ 0.71
VAPA-201ENST00000340541 NBPF7P0C2Y1 421 aaPredicted RBP19.47■□□□□ 0.71
VAPA-201ENST00000340541 ECE1P42892 770 aa19.47■□□□□ 0.71
VAPA-201ENST00000340541 CDC5LQ99459 802 aaKnown RBP19.47■□□□□ 0.71
VAPA-201ENST00000340541 PODXL2Q9NZ53 605 aa19.47■□□□□ 0.71
VAPA-201ENST00000340541 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
VAPA-201ENST00000340541 POLLQ9UGP5 575 aa19.47■□□□□ 0.71
VAPA-201ENST00000340541 ITGA6P23229 1130 aa19.46■□□□□ 0.71
VAPA-201ENST00000340541 GMPSP49915 693 aaPredicted RBP19.46■□□□□ 0.71
VAPA-201ENST00000340541 CST9Q5W186 159 aa19.46■□□□□ 0.71
VAPA-201ENST00000340541 WASHC4Q2M389 1173 aa19.45■□□□□ 0.7
VAPA-201ENST00000340541 TBC1D16Q8TBP0 767 aa19.45■□□□□ 0.7
VAPA-201ENST00000340541 DPF2Q92785 391 aa19.45■□□□□ 0.7
VAPA-201ENST00000340541 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
VAPA-201ENST00000340541 BSDC1Q9NW68 430 aaPredicted RBP19.45■□□□□ 0.7
VAPA-201ENST00000340541 TRPM7Q96QT4 1865 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 CAPN15O75808 1086 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 RAD17O75943 681 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 LMBR1LQ6UX01 489 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 MINPP1Q9UNW1 487 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 TLL2Q9Y6L7 1015 aa19.44■□□□□ 0.7
VAPA-201ENST00000340541 H7C1D1 291 aa19.43■□□□□ 0.7
VAPA-201ENST00000340541 BCAR3O75815 825 aa19.43■□□□□ 0.7
VAPA-201ENST00000340541 ARHGAP45Q92619 1136 aa19.43■□□□□ 0.7
VAPA-201ENST00000340541 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
VAPA-201ENST00000340541 GPR101Q96P66 508 aaPredicted RBP19.43■□□□□ 0.7
VAPA-201ENST00000340541 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
VAPA-201ENST00000340541 CNOT7Q9UIV1 285 aaKnown RBP19.43■□□□□ 0.7
VAPA-201ENST00000340541 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
VAPA-201ENST00000340541 YDJCA8MPS7 323 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 C6orf229H3BNL8 230 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 TRAF5O00463 557 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 MAP2K2P36507 400 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 CDC37L1Q7L3B6 337 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 CAPNS2Q96L46 248 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 EYA3Q99504 573 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 ANKIB1Q9P2G1 1089 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 XDHP47989 1333 aa19.42■□□□□ 0.7
VAPA-201ENST00000340541 ANKRD18BA2A2Z9 1011 aa19.41■□□□□ 0.7
VAPA-201ENST00000340541 WTIPA6NIX2 430 aaPredicted RBP19.41■□□□□ 0.7
VAPA-201ENST00000340541 UFL1O94874 794 aa19.41■□□□□ 0.7
VAPA-201ENST00000340541 IGHMBP2P38935 993 aaKnown RBP19.41■□□□□ 0.7
VAPA-201ENST00000340541 CCT4P50991 539 aaKnown RBP19.41■□□□□ 0.7
VAPA-201ENST00000340541 FMR1Q06787 632 aaKnown RBP eCLIP19.41■□□□□ 0.72e-21■■□□□ 12.1
VAPA-201ENST00000340541 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
VAPA-201ENST00000340541 A0A1B0GUL6 1792 aa19.41■□□□□ 0.7
VAPA-201ENST00000340541 RIMBP2O15034 1052 aa19.4■□□□□ 0.7
VAPA-201ENST00000340541 RPS12P25398 132 aaKnown RBP19.4■□□□□ 0.7
VAPA-201ENST00000340541 LBX1P52954 281 aa19.4■□□□□ 0.7
VAPA-201ENST00000340541 HIRAP54198 1017 aaPredicted RBP19.4■□□□□ 0.7
VAPA-201ENST00000340541 IFIT5Q13325 482 aaKnown RBP19.4■□□□□ 0.7
VAPA-201ENST00000340541 SAPCD2Q86UD0 394 aa19.4■□□□□ 0.7
VAPA-201ENST00000340541 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
VAPA-201ENST00000340541 BICC1Q9H694 974 aaKnown RBP19.4■□□□□ 0.7
VAPA-201ENST00000340541 GGA1Q9UJY5 639 aa19.4■□□□□ 0.7
VAPA-201ENST00000340541 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms