RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
SDCBP2-201ENST00000339987 OS9Q13438 667 aaPredicted RBP22.13■■□□□ 1.13
SDCBP2-201ENST00000339987 FHDC1Q9C0D6 1143 aaPredicted RBP22.13■■□□□ 1.13
SDCBP2-201ENST00000339987 LRRC37AA6NMS7 1700 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 PPEF1O14829 653 aaPredicted RBP22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 BRCA1P38398 1863 aaKnown RBP22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 SASH1O94885 1247 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 KIF1BPQ96EK5 621 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 RHPN1Q8TCX5 695 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 ATP6V0A2Q9Y487 856 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 CACNA1SQ13698 1873 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 METTL24Q5JXM2 366 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 CEP126Q9P2H0 1117 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 A0A1B0GUL6 1792 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 CHRNDQ07001 517 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 VGLL2Q8N8G2 317 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 ANKRD2Q9GZV1 360 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 NUCB1Q02818 461 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 TFCP2Q12800 502 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 C7orf43Q8WVR3 580 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 APBB1O00213 710 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 PDE8BO95263 885 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 DALRD3Q5D0E6 543 aaKnown RBP22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 SYT17Q9BSW7 474 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 PODXL2Q9NZ53 605 aa22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 AKAP2Q9Y2D5 859 aa22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 XDHP47989 1333 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 GRIPAP1Q4V328 841 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 CHD1LQ86WJ1 897 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 CLASRPQ8N2M8 674 aaKnown RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 HELBQ8NG08 1087 aaPredicted RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 LTBP1Q14766 1721 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 ZNF609O15014 1411 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 GPSM2P81274 684 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 PUM3Q15397 648 aaKnown RBP22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 TNNI3KQ59H18 835 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SLC51AQ86UW1 340 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 FPGT-TNNI3KV9GXZ4 949 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 TAF5LO75529 589 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 FGFR2P21802 821 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 ANKIB1Q9P2G1 1089 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 LEMD3Q9Y2U8 911 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 C21orf2O43822 256 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ATP2B4P23634 1241 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 UBE4AQ14139 1066 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ATP2B3Q16720 1220 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ARFGEF1Q9Y6D6 1849 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 CCDC93Q567U6 631 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 OLFM4Q6UX06 510 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 MPNDQ8N594 471 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 LPIN2Q92539 896 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 EAF2Q96CJ1 260 aaPredicted RBP22■■□□□ 1.11
SDCBP2-201ENST00000339987 LNPKQ9C0E8 428 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 NSFL1CQ9UNZ2 370 aaKnown RBP22■■□□□ 1.11
SDCBP2-201ENST00000339987 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 GGA1Q9UJY5 639 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 ZNF804BA4D1E1 1349 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 ARAP2Q8WZ64 1704 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 A0A1B0GUL7 405 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 IFIT1P09914 478 aaKnown RBP21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 SLC5A1P13866 664 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 DPP8Q6V1X1 898 aaPredicted RBP21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 AACSQ86V21 672 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 RTKN2Q8IZC4 609 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 KCNJ4P48050 445 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 TBC1D16Q8TBP0 767 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 RTFDC1Q9BY42 306 aaPredicted RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 SNAP23O00161 211 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 UFL1O94874 794 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 TIMM10P62072 90 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 C15orf52Q6ZUT6 534 aaKnown RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 POLLQ9UGP5 575 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 NEUROD6Q96NK8 337 aa21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 PSMD1Q99460 953 aa21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 DBNLQ9UJU6 430 aaKnown RBP21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 SALL3Q9BXA9 1300 aa21.95■■□□□ 1.11
SDCBP2-201ENST00000339987 IRS2Q9Y4H2 1338 aa21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms