RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SRCIN1Q9C0H9 1055 aa19.37■□□□□ 0.69
PRKN-201ENST00000338468 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
PRKN-201ENST00000338468 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
PRKN-201ENST00000338468 GRM8O00222 908 aa19.36■□□□□ 0.69
PRKN-201ENST00000338468 VEGFBP49765 207 aa19.36■□□□□ 0.69
PRKN-201ENST00000338468 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
PRKN-201ENST00000338468 ANKRD18AQ8IVF6 992 aa19.36■□□□□ 0.69
PRKN-201ENST00000338468 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
PRKN-201ENST00000338468 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
PRKN-201ENST00000338468 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
PRKN-201ENST00000338468 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
PRKN-201ENST00000338468 NIM1KQ8IY84 436 aa19.35■□□□□ 0.69
PRKN-201ENST00000338468 TBC1D16Q8TBP0 767 aa19.35■□□□□ 0.69
PRKN-201ENST00000338468 GPR101Q96P66 508 aaPredicted RBP19.35■□□□□ 0.69
PRKN-201ENST00000338468 CDC5LQ99459 802 aaKnown RBP19.35■□□□□ 0.69
PRKN-201ENST00000338468 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
PRKN-201ENST00000338468 RARSP54136 660 aaKnown RBP19.34■□□□□ 0.69
PRKN-201ENST00000338468 EIF6P56537 245 aaKnown RBP19.34■□□□□ 0.69
PRKN-201ENST00000338468 GPC2Q8N158 579 aa19.34■□□□□ 0.69
PRKN-201ENST00000338468 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
PRKN-201ENST00000338468 UTYO14607 1347 aa19.33■□□□□ 0.69
PRKN-201ENST00000338468 YDJCA8MPS7 323 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 ITGBL1O95965 494 aaPredicted RBP19.33■□□□□ 0.68
PRKN-201ENST00000338468 ITGA6P23229 1130 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 EPHX2P34913 555 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 KAZALD1Q96I82 304 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 BSDC1Q9NW68 430 aaPredicted RBP19.33■□□□□ 0.68
PRKN-201ENST00000338468 ZNRF3Q9ULT6 936 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 ADAMTSL1Q8N6G6 1762 aa19.33■□□□□ 0.68
PRKN-201ENST00000338468 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
PRKN-201ENST00000338468 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
PRKN-201ENST00000338468 NBPF7P0C2Y1 421 aaPredicted RBP19.32■□□□□ 0.68
PRKN-201ENST00000338468 CXCL9Q07325 125 aa19.32■□□□□ 0.68
PRKN-201ENST00000338468 WASHC4Q2M389 1173 aa19.32■□□□□ 0.68
PRKN-201ENST00000338468 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
PRKN-201ENST00000338468 WBP1LQ9NX94 342 aa19.32■□□□□ 0.68
PRKN-201ENST00000338468 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
PRKN-201ENST00000338468 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
PRKN-201ENST00000338468 MINPP1Q9UNW1 487 aa19.32■□□□□ 0.68
PRKN-201ENST00000338468 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
PRKN-201ENST00000338468 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
PRKN-201ENST00000338468 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
PRKN-201ENST00000338468 GJA3Q9Y6H8 435 aa19.31■□□□□ 0.68
PRKN-201ENST00000338468 XDHP47989 1333 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 RASSF10A6NK89 507 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 UFL1O94874 794 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 LBX1P52954 281 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 LMBR1LQ6UX01 489 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 GGA1Q9UJY5 639 aa19.3■□□□□ 0.68
PRKN-201ENST00000338468 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
PRKN-201ENST00000338468 SCNN1DP51172 638 aa19.29■□□□□ 0.68
PRKN-201ENST00000338468 CNTROBQ8N137 903 aa19.29■□□□□ 0.68
PRKN-201ENST00000338468 USP44Q9H0E7 712 aa19.29■□□□□ 0.68
PRKN-201ENST00000338468 DBNDD1Q9H9R9 158 aa19.29■□□□□ 0.68
PRKN-201ENST00000338468 ANKRD18BA2A2Z9 1011 aa19.28■□□□□ 0.68
PRKN-201ENST00000338468 RAD17O75943 681 aa19.28■□□□□ 0.68
PRKN-201ENST00000338468 IGHMBP2P38935 993 aaKnown RBP19.28■□□□□ 0.68
PRKN-201ENST00000338468 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
PRKN-201ENST00000338468 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
PRKN-201ENST00000338468 EYA3Q99504 573 aa19.28■□□□□ 0.68
PRKN-201ENST00000338468 MAP2K1Q02750 393 aaPredicted RBP19.27■□□□□ 0.68
PRKN-201ENST00000338468 DEFB115Q30KQ5 88 aa19.27■□□□□ 0.68
PRKN-201ENST00000338468 CIAPIN1Q6FI81 312 aa19.27■□□□□ 0.68
PRKN-201ENST00000338468 KCNQ5Q9NR82 932 aa19.27■□□□□ 0.68
PRKN-201ENST00000338468 ABT1Q9ULW3 272 aaKnown RBP19.27■□□□□ 0.68
PRKN-201ENST00000338468 ECE2O60344 883 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 BCAR3O75815 825 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 ATP2B4P23634 1241 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 EPS15P42566 896 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 IFIT5Q13325 482 aaKnown RBP19.26■□□□□ 0.67
PRKN-201ENST00000338468 ANKRD44Q8N8A2 993 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 CHMP3Q9Y3E7 222 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 SCN9AQ15858 1988 aa19.26■□□□□ 0.67
PRKN-201ENST00000338468 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 A0A1B0GUL6 1792 aa19.25■□□□□ 0.67
PRKN-201ENST00000338468 HSPA8P11142 646 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 GMPSP49915 693 aaPredicted RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 CCT4P50991 539 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 ZNF594Q96JF6 807 aaPredicted RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 MPHOSPH8Q99549 860 aa19.25■□□□□ 0.67
PRKN-201ENST00000338468 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 ZC3H12CQ9C0D7 883 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
PRKN-201ENST00000338468 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
PRKN-201ENST00000338468 CHRNDQ07001 517 aa19.24■□□□□ 0.67
PRKN-201ENST00000338468 ARHGAP45Q92619 1136 aa19.24■□□□□ 0.67
PRKN-201ENST00000338468 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
PRKN-201ENST00000338468 GPRC5DQ9NZD1 345 aa19.24■□□□□ 0.67
PRKN-201ENST00000338468 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
PRKN-201ENST00000338468 MED23Q9ULK4 1368 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 THSD7BQ9C0I4 1608 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 PSMD14O00487 310 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 TNIP1Q15025 636 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 CCDC57Q2TAC2 916 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 TXNRD3Q86VQ6 643 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
PRKN-201ENST00000338468 KLRK1P26718 216 aa19.22■□□□□ 0.67
PRKN-201ENST00000338468 ANKRD2Q9GZV1 360 aa19.22■□□□□ 0.67
PRKN-201ENST00000338468 LEMD3Q9Y2U8 911 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms