RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
LIMK2-202ENST00000333611 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC102AQ96A19 550 aa13.82□□□□□ -0.2
LIMK2-202ENST00000333611 MYL6BP14649 208 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 LTKP29376 864 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 GUCY1B3Q02153 619 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC144BQ3MJ40 725 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 ERCC4Q92889 916 aaPredicted RBP13.81□□□□□ -0.2
LIMK2-202ENST00000333611 CBX8Q9HC52 389 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
LIMK2-202ENST00000333611 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 MAP2K2P36507 400 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 NRDCO43847 1150 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 JAK2O60674 1132 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC172P0C7W6 258 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 HOXC9P31274 260 aa13.81□□□□□ -0.2
LIMK2-202ENST00000333611 SMC1AQ14683 1233 aaKnown RBP13.81□□□□□ -0.2
LIMK2-202ENST00000333611 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
LIMK2-202ENST00000333611 NEO1Q92859 1461 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 PROSER3Q2NL68 480 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 GUCY2CP25092 1073 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 ZNF75DP51815 510 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC91Q7Z6B0 441 aa13.8□□□□□ -0.2
LIMK2-202ENST00000333611 RIMS1Q86UR5 1692 aaKnown RBP13.79□□□□□ -0.2
LIMK2-202ENST00000333611 SRLQ86TD4 932 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
LIMK2-202ENST00000333611 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 CXorf56Q9H5V9 222 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 CHGBP05060 677 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
LIMK2-202ENST00000333611 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
LIMK2-202ENST00000333611 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 H0YHG0 523 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 USP6P35125 1406 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 CCDC129Q6ZRS4 1044 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
LIMK2-202ENST00000333611 SUFUQ9UMX1 484 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 CENPHQ9H3R5 247 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 IGSF1Q8N6C5 1336 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
LIMK2-202ENST00000333611 PLEKHG3A1L390 1219 aa13.77□□□□□ -0.2
LIMK2-202ENST00000333611 NR1I2O75469 434 aa13.77□□□□□ -0.2
LIMK2-202ENST00000333611 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.2
LIMK2-202ENST00000333611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.2
LIMK2-202ENST00000333611 SLC27A2O14975 620 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 PSMA5P28066 241 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 EAF2Q96CJ1 260 aaPredicted RBP13.77□□□□□ -0.21
LIMK2-202ENST00000333611 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
LIMK2-202ENST00000333611 ST3GAL1Q11201 340 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 GIMAP7Q8NHV1 300 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 FHOD1Q9Y613 1164 aa13.77□□□□□ -0.21
LIMK2-202ENST00000333611 CLTCQ00610 1675 aaKnown RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 PDCP20941 246 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 LIG3P49916 1009 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 CCT2P78371 535 aaKnown RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 BRF1Q92994 677 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 EVCP57679 992 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 POLA2Q14181 598 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 ZSWIM6Q9HCJ5 1215 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 EIF4A1P60842 406 aaKnown RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 SYCP1Q15431 976 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
LIMK2-202ENST00000333611 AOX1Q06278 1338 aa13.76□□□□□ -0.21
LIMK2-202ENST00000333611 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
LIMK2-202ENST00000333611 SLC39A6Q13433 755 aa13.75□□□□□ -0.21
LIMK2-202ENST00000333611 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
LIMK2-202ENST00000333611 RPAINQ86UA6 219 aa13.75□□□□□ -0.21
LIMK2-202ENST00000333611 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
LIMK2-202ENST00000333611 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
LIMK2-202ENST00000333611 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
LIMK2-202ENST00000333611 CHST3Q7LGC8 479 aa13.75□□□□□ -0.21
LIMK2-202ENST00000333611 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
LIMK2-202ENST00000333611 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms