RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 CTSWP56202 376 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 Q6ZUG5 572 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 SH3TC1Q8TE82 1336 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 APOBRQ0VD83 1088 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 ME3Q16798 604 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 HIP1O00291 1037 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 JAK2O60674 1132 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 GYG1P46976 350 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 RALYLQ86SE5 291 aaKnown RBP10.74□□□□□ -0.69
COPB2-201ENST00000333188 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
COPB2-201ENST00000333188 NEK1Q96PY6 1258 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 TPCN1Q9ULQ1 816 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 AK9Q5TCS8 1911 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 ATP5JP18859 108 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 PSMA5P28066 241 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 NFXL1Q6ZNB6 911 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 TRIM44Q96DX7 344 aaPredicted RBP10.74□□□□□ -0.69
COPB2-201ENST00000333188 ZKSCAN3Q9BRR0 538 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
COPB2-201ENST00000333188 AKAP2Q9Y2D5 859 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 RGPD1P0DJD0 1748 aa10.74□□□□□ -0.69
COPB2-201ENST00000333188 SPATA31A1Q5TZJ5 1347 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 HSPA1LP34931 641 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 RFC4P35249 363 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 DCCP43146 1447 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 TRIM37O94972 964 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 KBTBD3Q8NAB2 608 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 OSBP2Q969R2 916 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 PCCAP05165 728 aaPredicted RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 CYP21A2P08686 494 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 SYT1P21579 422 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 DNM1Q05193 864 aaKnown RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 CAMK4Q16566 473 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 MAGEB6Q8N7X4 407 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 SETDB2Q96T68 719 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 PUS7LQ9H0K6 701 aaKnown RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 ANKIB1Q9P2G1 1089 aa10.73□□□□□ -0.69
COPB2-201ENST00000333188 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
COPB2-201ENST00000333188 STRCP1A6NGW2 1772 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 CPLX1O14810 134 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 PDE8AO60658 829 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 SLIT3O75094 1523 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 M0R2C6 588 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 CASP7P55210 303 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 MYL10Q9BUA6 226 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
COPB2-201ENST00000333188 DENND2AQ9ULE3 1009 aa10.72□□□□□ -0.69
COPB2-201ENST00000333188 STX6O43752 255 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 MCM2P49736 904 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 TRDNQ13061 729 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 GAS2L3Q86XJ1 694 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 AK7Q96M32 723 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 HAUS7Q99871 368 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
COPB2-201ENST00000333188 ZDHHC9Q9Y397 364 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 RNF113AO15541 343 aaKnown RBP10.71□□□□□ -0.69
COPB2-201ENST00000333188 TDO2P48775 406 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 GNL2Q13823 731 aaKnown RBP10.71□□□□□ -0.69
COPB2-201ENST00000333188 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
COPB2-201ENST00000333188 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.72e-8■□□□□ 8.5
COPB2-201ENST00000333188 MCAMP43121 646 aa10.71□□□□□ -0.7
COPB2-201ENST00000333188 RABL6Q3YEC7 729 aaPredicted RBP10.71□□□□□ -0.7
COPB2-201ENST00000333188 FAM196AQ6ZSG2 479 aa10.71□□□□□ -0.7
COPB2-201ENST00000333188 ARMT1Q9H993 441 aa10.71□□□□□ -0.7
COPB2-201ENST00000333188 PRDM1O75626 825 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 CCDC152Q4G0S7 254 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 LINC00116Q8NCU8 138 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 MAP4K1Q92918 833 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 ZNF652Q9Y2D9 606 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 RTCBQ9Y3I0 505 aaKnown RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 GPAA1O43292 621 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 ANAPC15P60006 121 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 INTS5Q6P9B9 1019 aaKnown RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
COPB2-201ENST00000333188 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
COPB2-201ENST00000333188 ZNF213O14771 459 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 PTMAP06454 111 aaKnown RBP10.69□□□□□ -0.7
COPB2-201ENST00000333188 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
COPB2-201ENST00000333188 TBC1D9BQ66K14 1250 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms