RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SCRN1Q12765 414 aa27.73■■■□□ 2.03
TSKU-201ENST00000333090 PTPN14Q15678 1187 aa27.72■■■□□ 2.03
TSKU-201ENST00000333090 RIC3Q7Z5B4 369 aa27.72■■■□□ 2.03
TSKU-201ENST00000333090 SEC62Q99442 399 aaKnown RBP27.72■■■□□ 2.03
TSKU-201ENST00000333090 IGKV5-2P06315 115 aa27.71■■■□□ 2.03
TSKU-201ENST00000333090 CYP21A2P08686 494 aa27.71■■■□□ 2.03
TSKU-201ENST00000333090 GOLPH3LQ9H4A5 285 aa27.71■■■□□ 2.03
TSKU-201ENST00000333090 DDX41Q9UJV9 622 aaKnown RBP27.71■■■□□ 2.03
TSKU-201ENST00000333090 LTN1O94822 1766 aa27.71■■■□□ 2.03
TSKU-201ENST00000333090 TRMT1Q9NXH9 659 aaKnown RBP27.71■■■□□ 2.03
TSKU-201ENST00000333090 NEMFO60524 1076 aa27.7■■■□□ 2.03
TSKU-201ENST00000333090 RBM6P78332 1123 aaKnown RBP27.7■■■□□ 2.03
TSKU-201ENST00000333090 CCDC73Q6ZRK6 1079 aa27.7■■■□□ 2.03
TSKU-201ENST00000333090 DNAJC2Q99543 621 aaKnown RBP27.7■■■□□ 2.03
TSKU-201ENST00000333090 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.7■■■□□ 2.03
TSKU-201ENST00000333090 V9GYY5 206 aaPredicted RBP27.7■■■□□ 2.03
TSKU-201ENST00000333090 CCDC69A6NI79 296 aa27.7■■■□□ 2.02
TSKU-201ENST00000333090 CTAGE5O15320 804 aa27.7■■■□□ 2.02
TSKU-201ENST00000333090 ADD1P35611 737 aaKnown RBP27.7■■■□□ 2.02
TSKU-201ENST00000333090 DBNLQ9UJU6 430 aaKnown RBP27.7■■■□□ 2.02
TSKU-201ENST00000333090 EPHA10Q5JZY3 1008 aa27.69■■■□□ 2.02
TSKU-201ENST00000333090 ZNF771Q7L3S4 317 aaPredicted RBP27.69■■■□□ 2.02
TSKU-201ENST00000333090 FBXW7Q969H0 707 aa27.69■■■□□ 2.02
TSKU-201ENST00000333090 ZNF215Q9UL58 517 aaPredicted RBP27.69■■■□□ 2.02
TSKU-201ENST00000333090 DDX21Q9NR30 783 aaKnown RBP eCLIP27.69■■■□□ 2.02
TSKU-201ENST00000333090 AXIN2Q9Y2T1 843 aa27.69■■■□□ 2.02
TSKU-201ENST00000333090 U3KPZ7 1027 aaPredicted RBP27.69■■■□□ 2.02
TSKU-201ENST00000333090 KINO60870 393 aaKnown RBP27.69■■■□□ 2.02
TSKU-201ENST00000333090 PPFIA3O75145 1194 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 AMOTQ4VCS5 1084 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 PXDNQ92626 1479 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 ERCC4Q92889 916 aaPredicted RBP27.68■■■□□ 2.02
TSKU-201ENST00000333090 RCOR1Q9UKL0 485 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 NYAP1Q6ZVC0 841 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 USP28Q96RU2 1077 aa27.68■■■□□ 2.02
TSKU-201ENST00000333090 ATP5JP18859 108 aa27.67■■■□□ 2.02
TSKU-201ENST00000333090 SNW1Q13573 536 aaKnown RBP27.67■■■□□ 2.02
TSKU-201ENST00000333090 KIF18AQ8NI77 898 aa27.67■■■□□ 2.02
TSKU-201ENST00000333090 SMARCC2Q8TAQ2 1214 aa27.67■■■□□ 2.02
TSKU-201ENST00000333090 GCP02774 474 aa27.67■■■□□ 2.02
TSKU-201ENST00000333090 DHX40Q8IX18 779 aaKnown RBP27.67■■■□□ 2.02
TSKU-201ENST00000333090 HEG1Q9ULI3 1381 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 NEXNQ0ZGT2 675 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 NSUN7Q8NE18 718 aaKnown RBP27.66■■■□□ 2.02
TSKU-201ENST00000333090 DDX17Q92841 729 aaKnown RBP27.66■■■□□ 2.02
TSKU-201ENST00000333090 ANO10Q9NW15 660 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 ZNF609O15014 1411 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 MYL6BP14649 208 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 CCZ1BP86790 482 aa27.66■■■□□ 2.02
TSKU-201ENST00000333090 CCZ1P86791 482 aaPredicted RBP27.66■■■□□ 2.02
TSKU-201ENST00000333090 RGPD2P0DJD1 1756 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 PTPDC1A2A3K4 754 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 NEURL1BA8MQ27 555 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 ME1P48163 572 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 TFCP2Q12800 502 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 PDIA6Q15084 440 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 TNNI3KQ59H18 835 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 NAA16Q6N069 864 aaPredicted RBP27.65■■■□□ 2.02
TSKU-201ENST00000333090 STOX1Q6ZVD7 989 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 DDX46Q7L014 1031 aaKnown RBP27.65■■■□□ 2.02
TSKU-201ENST00000333090 NAP1L2Q9ULW6 460 aaPredicted RBP27.65■■■□□ 2.02
TSKU-201ENST00000333090 FPGT-TNNI3KV9GXZ4 949 aa27.65■■■□□ 2.02
TSKU-201ENST00000333090 LMO7Q8WWI1 1683 aa27.64■■■□□ 2.02
TSKU-201ENST00000333090 PFKFB2O60825 505 aa27.64■■■□□ 2.02
TSKU-201ENST00000333090 CCT2P78371 535 aaKnown RBP27.64■■■□□ 2.02
TSKU-201ENST00000333090 MCMDC2Q4G0Z9 681 aa27.64■■■□□ 2.02
TSKU-201ENST00000333090 AOPEPQ8N6M6 819 aa27.64■■■□□ 2.02
TSKU-201ENST00000333090 LLPHQ9BRT6 129 aaKnown RBP27.64■■■□□ 2.02
TSKU-201ENST00000333090 APOBRQ0VD83 1088 aa27.64■■■□□ 2.01
TSKU-201ENST00000333090 KMT5BQ4FZB7 885 aa27.64■■■□□ 2.01
TSKU-201ENST00000333090 CCDC9Q9Y3X0 531 aaKnown RBP27.64■■■□□ 2.01
TSKU-201ENST00000333090 USP54Q70EL1 1684 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 GUCY1B3Q02153 619 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 FAM160A1Q05DH4 1040 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 GCKRQ14397 625 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 CEP57L1Q8IYX8 460 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 FSIP1Q8NA03 581 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 MYD88Q99836 296 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 MORC2Q9Y6X9 1032 aaPredicted RBP27.63■■■□□ 2.01
TSKU-201ENST00000333090 CTDNEP1O95476 244 aa27.63■■■□□ 2.01
TSKU-201ENST00000333090 ZC3H6P61129 1189 aaKnown RBP27.63■■■□□ 2.01
TSKU-201ENST00000333090 CCAR2Q8N163 923 aaKnown RBP27.63■■■□□ 2.01
TSKU-201ENST00000333090 ZNF397Q8NF99 534 aaPredicted RBP27.63■■■□□ 2.01
TSKU-201ENST00000333090 GABPB1Q06547 395 aaPredicted RBP27.62■■■□□ 2.01
TSKU-201ENST00000333090 ENGASEQ8NFI3 743 aa27.62■■■□□ 2.01
TSKU-201ENST00000333090 ANKRD24Q8TF21 1146 aa27.61■■■□□ 2.01
TSKU-201ENST00000333090 DBNDD2Q9BQY9 259 aa27.61■■■□□ 2.01
TSKU-201ENST00000333090 NCOA5Q9HCD5 579 aaKnown RBP27.61■■■□□ 2.01
TSKU-201ENST00000333090 ZNF396Q96N95 335 aaPredicted RBP27.61■■■□□ 2.01
TSKU-201ENST00000333090 NFAT5O94916 1531 aa27.61■■■□□ 2.01
TSKU-201ENST00000333090 ELF2Q15723 593 aa27.61■■■□□ 2.01
TSKU-201ENST00000333090 DHX32Q7L7V1 743 aaKnown RBP27.61■■■□□ 2.01
TSKU-201ENST00000333090 COPRSQ9NQ92 184 aa27.61■■■□□ 2.01
TSKU-201ENST00000333090 XAGE3Q8WTP9 111 aa27.6■■■□□ 2.01
TSKU-201ENST00000333090 NCAPD2Q15021 1401 aa27.6■■■□□ 2.01
TSKU-201ENST00000333090 SLC39A6Q13433 755 aa27.6■■■□□ 2.01
TSKU-201ENST00000333090 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
TSKU-201ENST00000333090 PTPN12Q05209 780 aaKnown RBP27.59■■■□□ 2.01
TSKU-201ENST00000333090 COPS6Q7L5N1 327 aa27.59■■■□□ 2.01
TSKU-201ENST00000333090 ERO1AQ96HE7 468 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms