RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
C11orf88-201ENST00000332814 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
C11orf88-201ENST00000332814 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
C11orf88-201ENST00000332814 G3V3G9 751 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 GNAI3P08754 354 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 DCAF8Q5TAQ9 597 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 TBC1D16Q8TBP0 767 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
C11orf88-201ENST00000332814 RIMBP2O15034 1052 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 ATP2B4P23634 1241 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
C11orf88-201ENST00000332814 DZIP1LQ8IYY4 767 aaKnown RBP20.53■□□□□ 0.88
C11orf88-201ENST00000332814 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 CNNM1Q9NRU3 951 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 POLLQ9UGP5 575 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 TNNQ9UQP3 1299 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 DUOX1Q9NRD9 1551 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
C11orf88-201ENST00000332814 FZD9O00144 591 aa20.52■□□□□ 0.88
C11orf88-201ENST00000332814 MS4A1P11836 297 aa20.52■□□□□ 0.88
C11orf88-201ENST00000332814 KCNJ4P48050 445 aa20.52■□□□□ 0.88
C11orf88-201ENST00000332814 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.88
C11orf88-201ENST00000332814 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
C11orf88-201ENST00000332814 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
C11orf88-201ENST00000332814 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
C11orf88-201ENST00000332814 ZNF541Q9H0D2 1346 aa20.52■□□□□ 0.87
C11orf88-201ENST00000332814 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
C11orf88-201ENST00000332814 ANKRD44Q8N8A2 993 aa20.51■□□□□ 0.87
C11orf88-201ENST00000332814 MEIS3Q99687 375 aa20.51■□□□□ 0.87
C11orf88-201ENST00000332814 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
C11orf88-201ENST00000332814 ZNRF3Q9ULT6 936 aa20.51■□□□□ 0.87
C11orf88-201ENST00000332814 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
C11orf88-201ENST00000332814 TMEM57Q8N5G2 664 aa20.5■□□□□ 0.87
C11orf88-201ENST00000332814 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
C11orf88-201ENST00000332814 LRRFIP2Q9Y608 721 aaKnown RBP20.5■□□□□ 0.87
C11orf88-201ENST00000332814 GJA3Q9Y6H8 435 aa20.5■□□□□ 0.87
C11orf88-201ENST00000332814 CHRNDQ07001 517 aa20.49■□□□□ 0.87
C11orf88-201ENST00000332814 GPC2Q8N158 579 aa20.49■□□□□ 0.87
C11orf88-201ENST00000332814 GPR101Q96P66 508 aaPredicted RBP20.49■□□□□ 0.87
C11orf88-201ENST00000332814 LEMD3Q9Y2U8 911 aa20.49■□□□□ 0.87
C11orf88-201ENST00000332814 COL4A5P29400 1685 aa20.48■□□□□ 0.87
C11orf88-201ENST00000332814 LTBP1Q14766 1721 aa20.48■□□□□ 0.87
C11orf88-201ENST00000332814 IQCA1LA6NCM1 817 aa20.48■□□□□ 0.87
C11orf88-201ENST00000332814 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
C11orf88-201ENST00000332814 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.48■□□□□ 0.87
C11orf88-201ENST00000332814 DBNDD1Q9H9R9 158 aa20.48■□□□□ 0.87
C11orf88-201ENST00000332814 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
C11orf88-201ENST00000332814 ZNF804BA4D1E1 1349 aa20.47■□□□□ 0.87
C11orf88-201ENST00000332814 MED23Q9ULK4 1368 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 KIF3CO14782 793 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 PLIN1O60240 522 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 ECE2O60344 883 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 GNAI2P04899 355 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
C11orf88-201ENST00000332814 TNIP1Q15025 636 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 DOK7Q18PE1 504 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 CIAPIN1Q6FI81 312 aa20.46■□□□□ 0.87
C11orf88-201ENST00000332814 WDR90Q96KV7 1748 aa20.45■□□□□ 0.86
C11orf88-201ENST00000332814 L3MBTL3Q96JM7 780 aaPredicted RBP20.45■□□□□ 0.86
C11orf88-201ENST00000332814 MROH5Q6ZUA9 1318 aa20.45■□□□□ 0.86
C11orf88-201ENST00000332814 TAF5LO75529 589 aa20.44■□□□□ 0.86
C11orf88-201ENST00000332814 RAD17O75943 681 aa20.44■□□□□ 0.86
C11orf88-201ENST00000332814 CXCL9Q07325 125 aa20.44■□□□□ 0.86
C11orf88-201ENST00000332814 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
C11orf88-201ENST00000332814 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
C11orf88-201ENST00000332814 PANK1Q8TE04 598 aa20.43■□□□□ 0.86
C11orf88-201ENST00000332814 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
C11orf88-201ENST00000332814 HACL1Q9UJ83 578 aa20.43■□□□□ 0.86
C11orf88-201ENST00000332814 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
C11orf88-201ENST00000332814 TOMM70O94826 608 aa20.42■□□□□ 0.86
C11orf88-201ENST00000332814 RLBP1P12271 317 aa20.42■□□□□ 0.86
C11orf88-201ENST00000332814 KLHDC4Q8TBB5 520 aa20.42■□□□□ 0.86
C11orf88-201ENST00000332814 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
C11orf88-201ENST00000332814 EYA2O00167 538 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 C1QTNF8P60827 252 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 COA1Q9GZY4 146 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 SIL1Q9H173 461 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 RIPOR2Q9Y4F9 1068 aa20.4■□□□□ 0.86
C11orf88-201ENST00000332814 WTIPA6NIX2 430 aaPredicted RBP20.39■□□□□ 0.85
C11orf88-201ENST00000332814 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.85
C11orf88-201ENST00000332814 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
C11orf88-201ENST00000332814 UBE4AQ14139 1066 aa20.39■□□□□ 0.85
C11orf88-201ENST00000332814 ZNF804AQ7Z570 1209 aa20.39■□□□□ 0.85
C11orf88-201ENST00000332814 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
C11orf88-201ENST00000332814 FBXW7Q969H0 707 aa20.39■□□□□ 0.85
C11orf88-201ENST00000332814 CHMP4BQ9H444 224 aaKnown RBP20.39■□□□□ 0.85
C11orf88-201ENST00000332814 FBXO3Q9UK99 471 aa20.39■□□□□ 0.85
C11orf88-201ENST00000332814 POTECB2RU33 542 aa20.38■□□□□ 0.85
C11orf88-201ENST00000332814 PSMD14O00487 310 aa20.38■□□□□ 0.85
C11orf88-201ENST00000332814 EPHX2P34913 555 aa20.38■□□□□ 0.85
C11orf88-201ENST00000332814 GMPSP49915 693 aaPredicted RBP20.38■□□□□ 0.85
C11orf88-201ENST00000332814 MTX1Q13505 466 aa20.38■□□□□ 0.85
C11orf88-201ENST00000332814 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
C11orf88-201ENST00000332814 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
C11orf88-201ENST00000332814 TAF1DQ9H5J8 278 aaPredicted RBP20.38■□□□□ 0.85
C11orf88-201ENST00000332814 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms