RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CHMP3Q9Y3E7 222 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 LRRC37AA6NMS7 1700 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 H0YIN7 160 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
C11orf54-201ENST00000331239 LDHAL6AQ6ZMR3 332 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 CLASRPQ8N2M8 674 aaKnown RBP11.65□□□□□ -0.54
C11orf54-201ENST00000331239 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 IGSF3O75054 1194 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
C11orf54-201ENST00000331239 OSBPL3Q9H4L5 887 aa11.65□□□□□ -0.54
C11orf54-201ENST00000331239 ANKRD45Q5TZF3 282 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 SP8Q8IXZ3 490 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 ARAP2Q8WZ64 1704 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
C11orf54-201ENST00000331239 UBE4AQ14139 1066 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 MSL1Q68DK7 614 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 C15orf52Q6ZUT6 534 aaKnown RBP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 PODXL2Q9NZ53 605 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 NPM3O75607 178 aaKnown RBP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 SASH1O94885 1247 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 PDE8BO95263 885 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 PTGER2P43116 358 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 ZNF512BQ96KM6 892 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 TMX4Q9H1E5 349 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 LEMD3Q9Y2U8 911 aa11.63□□□□□ -0.55
C11orf54-201ENST00000331239 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
C11orf54-201ENST00000331239 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 VGLL2Q8N8G2 317 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 PUM3Q15397 648 aaKnown RBP11.62□□□□□ -0.55
C11orf54-201ENST00000331239 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 PA2G4Q9UQ80 394 aaKnown RBP11.62□□□□□ -0.55
C11orf54-201ENST00000331239 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 KIAA1551Q9HCM1 1747 aa11.62□□□□□ -0.55
C11orf54-201ENST00000331239 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 LPIN2Q92539 896 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 PDGFDQ9GZP0 370 aaPredicted RBP11.61□□□□□ -0.55
C11orf54-201ENST00000331239 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 ERC2O15083 957 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 FGFR2P21802 821 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 TNNI3KQ59H18 835 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 METTL24Q5JXM2 366 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 FPGT-TNNI3KV9GXZ4 949 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 ZNF609O15014 1411 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
C11orf54-201ENST00000331239 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
C11orf54-201ENST00000331239 XDHP47989 1333 aa11.6□□□□□ -0.55
C11orf54-201ENST00000331239 BRCA1P38398 1863 aaKnown RBP11.6□□□□□ -0.55
C11orf54-201ENST00000331239 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
C11orf54-201ENST00000331239 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
C11orf54-201ENST00000331239 TFCP2Q12800 502 aa11.6□□□□□ -0.55
C11orf54-201ENST00000331239 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
C11orf54-201ENST00000331239 CELF1Q92879 486 aaKnown RBP11.6□□□□□ -0.55
C11orf54-201ENST00000331239 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
C11orf54-201ENST00000331239 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
C11orf54-201ENST00000331239 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
C11orf54-201ENST00000331239 SLC5A1P13866 664 aa11.59□□□□□ -0.55
C11orf54-201ENST00000331239 CHRNDQ07001 517 aa11.59□□□□□ -0.55
C11orf54-201ENST00000331239 TTLL6Q8N841 843 aa11.59□□□□□ -0.55
C11orf54-201ENST00000331239 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
C11orf54-201ENST00000331239 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
C11orf54-201ENST00000331239 PDS5AQ29RF7 1337 aaKnown RBP11.59□□□□□ -0.55
C11orf54-201ENST00000331239 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
C11orf54-201ENST00000331239 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
C11orf54-201ENST00000331239 SIL1Q9H173 461 aa11.59□□□□□ -0.55
C11orf54-201ENST00000331239 SEMA3EO15041 775 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 UQCRFS1P1P0C7P4 283 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 MX1P20591 662 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 PLEKHM2Q8IWE5 1019 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 RTFDC1Q9BY42 306 aaPredicted RBP11.58□□□□□ -0.56
C11orf54-201ENST00000331239 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
C11orf54-201ENST00000331239 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
C11orf54-201ENST00000331239 ATP5JP18859 108 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 AACSQ86V21 672 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 RTKN2Q8IZC4 609 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 C7orf43Q8WVR3 580 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 ARFGEF1Q9Y6D6 1849 aa11.58□□□□□ -0.56
C11orf54-201ENST00000331239 PDE1AP54750 535 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
C11orf54-201ENST00000331239 EAF2Q96CJ1 260 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-201ENST00000331239 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-201ENST00000331239 DUOX1Q9NRD9 1551 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms