RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-201ENST00000326195 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
ABCF1-201ENST00000326195 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
ABCF1-201ENST00000326195 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
ABCF1-201ENST00000326195 ABCC4O15439 1325 aa12.36□□□□□ -0.43
ABCF1-201ENST00000326195 ABCC6O95255 1503 aa12.36□□□□□ -0.43
ABCF1-201ENST00000326195 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-201ENST00000326195 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 PLSCR1O15162 318 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
ABCF1-201ENST00000326195 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
ABCF1-201ENST00000326195 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-201ENST00000326195 ST18O60284 1047 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 GYS1P13807 737 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
ABCF1-201ENST00000326195 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 SERPINB2P05120 415 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 PIBF1Q8WXW3 757 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 GREM2Q9H772 168 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 TAF5LO75529 589 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 CCDC57Q2TAC2 916 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
ABCF1-201ENST00000326195 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
ABCF1-201ENST00000326195 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-201ENST00000326195 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
ABCF1-201ENST00000326195 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
ABCF1-201ENST00000326195 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-201ENST00000326195 NDUFB9Q9Y6M9 179 aa12.33□□□□□ -0.44
ABCF1-201ENST00000326195 CHRNA5P30532 468 aa12.33□□□□□ -0.44
ABCF1-201ENST00000326195 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-201ENST00000326195 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-201ENST00000326195 REC8O95072 547 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 MCCP23508 829 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-201ENST00000326195 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
ABCF1-201ENST00000326195 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-201ENST00000326195 RILPL2Q969X0 211 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-201ENST00000326195 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 NUCB2P80303 420 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■■□□ 16.3
ABCF1-201ENST00000326195 CCDC191Q8NCU4 936 aa12.32□□□□□ -0.44
ABCF1-201ENST00000326195 PNPLA7Q6ZV29 1317 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
ABCF1-201ENST00000326195 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 KAZALD1Q96I82 304 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 ITGB4P16144 1822 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 DDR1Q08345 913 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 MPHOSPH8Q99549 860 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 USP42Q9H9J4 1324 aaKnown RBP12.31□□□□□ -0.44
ABCF1-201ENST00000326195 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
ABCF1-201ENST00000326195 USP25Q9UHP3 1055 aa12.31□□□□□ -0.44
ABCF1-201ENST00000326195 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 ITGA6P23229 1130 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 NLRP3Q96P20 1036 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 KCNJ4P48050 445 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 TIMM10P62072 90 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 RABEP1Q15276 862 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-201ENST00000326195 GORABQ5T7V8 394 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-201ENST00000326195 CNTNAP4Q9C0A0 1308 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
ABCF1-201ENST00000326195 MRC1P22897 1456 aa12.29□□□□□ -0.44
ABCF1-201ENST00000326195 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-201ENST00000326195 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
ABCF1-201ENST00000326195 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
ABCF1-201ENST00000326195 NAA30Q147X3 362 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-201ENST00000326195 RC3H1Q5TC82 1133 aaKnown RBP12.29□□□□□ -0.44
ABCF1-201ENST00000326195 SNRKQ9NRH2 765 aa12.29□□□□□ -0.44
ABCF1-201ENST00000326195 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-201ENST00000326195 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
ABCF1-201ENST00000326195 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 TSPY26PQ9H489 355 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 SLFN14P0C7P3 912 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
ABCF1-201ENST00000326195 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 PRR5LQ6MZQ0 368 aa12.28□□□□□ -0.44
ABCF1-201ENST00000326195 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms