RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 ROBO1Q9Y6N7 1651 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.52■■□□□ 1.68
LIMS2-201ENST00000324938 TCEANC2Q96MN5 208 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 PUS3Q9BZE2 481 aaKnown RBP25.52■■□□□ 1.68
LIMS2-201ENST00000324938 CCDC57Q2TAC2 916 aa25.51■■□□□ 1.67
LIMS2-201ENST00000324938 MAP3K15Q6ZN16 1313 aa25.51■■□□□ 1.67
LIMS2-201ENST00000324938 NUP98P52948 1817 aa25.51■■□□□ 1.67
LIMS2-201ENST00000324938 NEK1Q96PY6 1258 aa25.51■■□□□ 1.67
LIMS2-201ENST00000324938 AHDC1Q5TGY3 1603 aaPredicted RBP25.5■■□□□ 1.67
LIMS2-201ENST00000324938 KAT6BQ8WYB5 2073 aa25.5■■□□□ 1.67
LIMS2-201ENST00000324938 CEP126Q9P2H0 1117 aa25.5■■□□□ 1.67
LIMS2-201ENST00000324938 PHF14O94880 888 aa25.49■■□□□ 1.67
LIMS2-201ENST00000324938 CYP21A2P08686 494 aa25.49■■□□□ 1.67
LIMS2-201ENST00000324938 IFIT1P09914 478 aaKnown RBP25.49■■□□□ 1.67
LIMS2-201ENST00000324938 ZBTB38Q8NAP3 1195 aaPredicted RBP25.49■■□□□ 1.67
LIMS2-201ENST00000324938 MYH7P12883 1935 aa25.49■■□□□ 1.67
LIMS2-201ENST00000324938 ZMYM1Q5SVZ6 1142 aa25.49■■□□□ 1.67
LIMS2-201ENST00000324938 GIGYF2Q6Y7W6 1299 aaKnown RBP25.49■■□□□ 1.67
LIMS2-201ENST00000324938 DOT1LQ8TEK3 1739 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 CSF1RP07333 972 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 CLCN1P35523 988 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 UBE2HP62256 183 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 DSCC1Q9BVC3 393 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 CDHR2Q9BYE9 1310 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 ESPNB1AK53 854 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 PDCP20941 246 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 CSPP1Q1MSJ5 1256 aa25.48■■□□□ 1.67
LIMS2-201ENST00000324938 VPS37CA5D8V6 355 aaPredicted RBP25.47■■□□□ 1.67
LIMS2-201ENST00000324938 FAM89AQ96GI7 184 aa25.47■■□□□ 1.67
LIMS2-201ENST00000324938 AKAP2Q9Y2D5 859 aa25.47■■□□□ 1.67
LIMS2-201ENST00000324938 LARP1BQ659C4 914 aaKnown RBP25.46■■□□□ 1.67
LIMS2-201ENST00000324938 DTNBO60941 627 aa25.46■■□□□ 1.67
LIMS2-201ENST00000324938 FIBPO43427 364 aa25.45■■□□□ 1.66
LIMS2-201ENST00000324938 RNF113AO15541 343 aaKnown RBP25.45■■□□□ 1.66
LIMS2-201ENST00000324938 CYP19A1P11511 503 aaPredicted RBP25.45■■□□□ 1.66
LIMS2-201ENST00000324938 DNM1Q05193 864 aaKnown RBP25.45■■□□□ 1.66
LIMS2-201ENST00000324938 HSP90AB3PQ58FF7 597 aa25.45■■□□□ 1.66
LIMS2-201ENST00000324938 PDLIM2Q96JY6 352 aa25.45■■□□□ 1.66
LIMS2-201ENST00000324938 SLC4A9Q96Q91 983 aa25.45■■□□□ 1.66
LIMS2-201ENST00000324938 TSPY26PQ9H489 355 aa25.45■■□□□ 1.66
LIMS2-201ENST00000324938 RIC1Q4ADV7 1423 aa25.44■■□□□ 1.66
LIMS2-201ENST00000324938 CCDC183Q5T5S1 534 aa25.44■■□□□ 1.66
LIMS2-201ENST00000324938 GTF3C6Q969F1 213 aa25.44■■□□□ 1.66
LIMS2-201ENST00000324938 MAST3O60307 1309 aa25.44■■□□□ 1.66
LIMS2-201ENST00000324938 IFIT5Q13325 482 aaKnown RBP25.43■■□□□ 1.66
LIMS2-201ENST00000324938 NLRP10Q86W26 655 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 HMGB1P09429 215 aaKnown RBP25.43■■□□□ 1.66
LIMS2-201ENST00000324938 HLFQ16534 295 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 SLFNL1Q499Z3 407 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 CCDC158Q5M9N0 1113 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 Q6ZUG5 572 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 STOX1Q6ZVD7 989 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 ABCC12Q96J65 1359 aa25.43■■□□□ 1.66
LIMS2-201ENST00000324938 TAF7LQ5H9L4 462 aa25.42■■□□□ 1.66
LIMS2-201ENST00000324938 CDC37L1Q7L3B6 337 aa25.42■■□□□ 1.66
LIMS2-201ENST00000324938 XAGE2Q96GT9 111 aa25.42■■□□□ 1.66
LIMS2-201ENST00000324938 TTC39AQ5SRH9 613 aa25.42■■□□□ 1.66
LIMS2-201ENST00000324938 AKAP11Q9UKA4 1901 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 EXOC5O00471 708 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 ADORA1P30542 326 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 STK3Q13188 491 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 NRAPQ86VF7 1730 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 NWD2Q9ULI1 1742 aa25.41■■□□□ 1.66
LIMS2-201ENST00000324938 HSPD1P10809 573 aaKnown RBP25.4■■□□□ 1.66
LIMS2-201ENST00000324938 LRRFIP1Q32MZ4 808 aaKnown RBP25.4■■□□□ 1.66
LIMS2-201ENST00000324938 CCDC85AQ96PX6 553 aaPredicted RBP25.4■■□□□ 1.66
LIMS2-201ENST00000324938 ZBTB1Q9Y2K1 713 aa25.4■■□□□ 1.66
LIMS2-201ENST00000324938 GORABQ5T7V8 394 aa25.4■■□□□ 1.66
LIMS2-201ENST00000324938 LETM1O95202 739 aaPredicted RBP25.39■■□□□ 1.66
LIMS2-201ENST00000324938 GPTP24298 496 aa25.39■■□□□ 1.66
LIMS2-201ENST00000324938 MYH15Q9Y2K3 1946 aa25.39■■□□□ 1.65
LIMS2-201ENST00000324938 DHX32Q7L7V1 743 aaKnown RBP25.39■■□□□ 1.65
LIMS2-201ENST00000324938 KLHL34Q8N239 644 aa25.39■■□□□ 1.65
LIMS2-201ENST00000324938 TTLL11Q8NHH1 800 aa25.39■■□□□ 1.65
LIMS2-201ENST00000324938 M0R2C6 588 aa25.38■■□□□ 1.65
LIMS2-201ENST00000324938 CTSWP56202 376 aa25.38■■□□□ 1.65
LIMS2-201ENST00000324938 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
LIMS2-201ENST00000324938 LRP5O75197 1615 aa25.38■■□□□ 1.65
LIMS2-201ENST00000324938 ZFYP08048 801 aaPredicted RBP25.37■■□□□ 1.65
LIMS2-201ENST00000324938 HSP90B1P14625 803 aaKnown RBP25.37■■□□□ 1.65
LIMS2-201ENST00000324938 KRT85P78386 507 aa25.37■■□□□ 1.65
LIMS2-201ENST00000324938 FKBP4Q02790 459 aaKnown RBP eCLIP25.37■■□□□ 1.65
LIMS2-201ENST00000324938 HS1BP3Q53T59 392 aa25.37■■□□□ 1.65
LIMS2-201ENST00000324938 RIPOR2Q9Y4F9 1068 aa25.37■■□□□ 1.65
LIMS2-201ENST00000324938 BRF1Q92994 677 aa25.37■■□□□ 1.65
LIMS2-201ENST00000324938 AGXT2Q9BYV1 514 aa25.37■■□□□ 1.65
LIMS2-201ENST00000324938 ELP1O95163 1332 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 ARAP2Q8WZ64 1704 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 ERVV-1B6SEH8 477 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 ITGA6P23229 1130 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 IL6STP40189 918 aaPredicted RBP25.36■■□□□ 1.65
LIMS2-201ENST00000324938 OSBP2Q969R2 916 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 GREM2Q9H772 168 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 EXOSC10Q01780 885 aaKnown RBP25.36■■□□□ 1.65
LIMS2-201ENST00000324938 ATP2B3Q16720 1220 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 FERMT3Q86UX7 667 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 RNF214Q8ND24 703 aa25.36■■□□□ 1.65
LIMS2-201ENST00000324938 E7EWF7 191 aa25.35■■□□□ 1.65
LIMS2-201ENST00000324938 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
LIMS2-201ENST00000324938 DDX60Q8IY21 1712 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms