RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ELP1O95163 1332 aa26.53■■□□□ 1.84
PNKP-201ENST00000322344 MCM5P33992 734 aa26.53■■□□□ 1.84
PNKP-201ENST00000322344 ZMYM1Q5SVZ6 1142 aa26.53■■□□□ 1.84
PNKP-201ENST00000322344 TIMM10P62072 90 aa26.52■■□□□ 1.84
PNKP-201ENST00000322344 LRRC24Q50LG9 513 aa26.52■■□□□ 1.84
PNKP-201ENST00000322344 NAP1L5Q96NT1 182 aaPredicted RBP26.52■■□□□ 1.84
PNKP-201ENST00000322344 IFIT1P09914 478 aaKnown RBP26.51■■□□□ 1.83
PNKP-201ENST00000322344 CDC37L1Q7L3B6 337 aa26.51■■□□□ 1.83
PNKP-201ENST00000322344 A0A1B0GUL7 405 aa26.51■■□□□ 1.83
PNKP-201ENST00000322344 Q6ZUG5 572 aa26.51■■□□□ 1.83
PNKP-201ENST00000322344 CEP126Q9P2H0 1117 aa26.51■■□□□ 1.83
PNKP-201ENST00000322344 TOGARAM1Q9Y4F4 1720 aa26.5■■□□□ 1.83
PNKP-201ENST00000322344 CCDC57Q2TAC2 916 aa26.5■■□□□ 1.83
PNKP-201ENST00000322344 LRRFIP1Q32MZ4 808 aaKnown RBP26.5■■□□□ 1.83
PNKP-201ENST00000322344 KIF6Q6ZMV9 814 aa26.5■■□□□ 1.83
PNKP-201ENST00000322344 PLA2G12BQ9BX93 195 aa26.5■■□□□ 1.83
PNKP-201ENST00000322344 ZNF594Q96JF6 807 aaPredicted RBP26.49■■□□□ 1.83
PNKP-201ENST00000322344 AKAP2Q9Y2D5 859 aa26.49■■□□□ 1.83
PNKP-201ENST00000322344 STRCQ7RTU9 1775 aa26.49■■□□□ 1.83
PNKP-201ENST00000322344 PCCAP05165 728 aaPredicted RBP26.49■■□□□ 1.83
PNKP-201ENST00000322344 SCAND2PQ9GZW5 306 aaPredicted RBP26.49■■□□□ 1.83
PNKP-201ENST00000322344 RNF113AO15541 343 aaKnown RBP26.48■■□□□ 1.83
PNKP-201ENST00000322344 CHGBP05060 677 aa26.48■■□□□ 1.83
PNKP-201ENST00000322344 STK3Q13188 491 aa26.48■■□□□ 1.83
PNKP-201ENST00000322344 CCDC9Q9Y3X0 531 aaKnown RBP26.48■■□□□ 1.83
PNKP-201ENST00000322344 DHX32Q7L7V1 743 aaKnown RBP26.48■■□□□ 1.83
PNKP-201ENST00000322344 LLPHQ9BRT6 129 aaKnown RBP26.48■■□□□ 1.83
PNKP-201ENST00000322344 ZKSCAN5Q9Y2L8 839 aa26.48■■□□□ 1.83
PNKP-201ENST00000322344 HSP90B1P14625 803 aaKnown RBP26.47■■□□□ 1.83
PNKP-201ENST00000322344 NHSL1Q5SYE7 1610 aa26.46■■□□□ 1.83
PNKP-201ENST00000322344 ZNF500O60304 480 aaPredicted RBP26.46■■□□□ 1.83
PNKP-201ENST00000322344 DTNBO60941 627 aa26.46■■□□□ 1.83
PNKP-201ENST00000322344 STARD3NLO95772 234 aa26.46■■□□□ 1.83
PNKP-201ENST00000322344 ZNF335Q9H4Z2 1342 aaPredicted RBP26.46■■□□□ 1.83
PNKP-201ENST00000322344 CCDC158Q5M9N0 1113 aa26.46■■□□□ 1.83
PNKP-201ENST00000322344 TTC6Q86TZ1 520 aa26.46■■□□□ 1.83
PNKP-201ENST00000322344 FERMT3Q86UX7 667 aa26.45■■□□□ 1.82
PNKP-201ENST00000322344 FUCA2Q9BTY2 467 aa26.45■■□□□ 1.82
PNKP-201ENST00000322344 PUS3Q9BZE2 481 aaKnown RBP26.45■■□□□ 1.82
PNKP-201ENST00000322344 PFKFB2O60825 505 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 FGD1P98174 961 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 STOX1Q6ZVD7 989 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 ZBTB38Q8NAP3 1195 aaPredicted RBP26.44■■□□□ 1.82
PNKP-201ENST00000322344 ABCC12Q96J65 1359 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 MAST3O60307 1309 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 CSF1RP07333 972 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 DNAJC10Q8IXB1 793 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 BRF1Q92994 677 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 CHMP4CQ96CF2 233 aa26.44■■□□□ 1.82
PNKP-201ENST00000322344 HSPD1P10809 573 aaKnown RBP26.43■■□□□ 1.82
PNKP-201ENST00000322344 SMARCC2Q8TAQ2 1214 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 PIGBQ92521 554 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 AGXT2Q9BYV1 514 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.43■■□□□ 1.82
PNKP-201ENST00000322344 CDHR2Q9BYE9 1310 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 OFD1O75665 1012 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 ZFYP08048 801 aaPredicted RBP26.43■■□□□ 1.82
PNKP-201ENST00000322344 TTC39AQ5SRH9 613 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 GORABQ5T7V8 394 aa26.43■■□□□ 1.82
PNKP-201ENST00000322344 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.43■■□□□ 1.82
PNKP-201ENST00000322344 MAP3K15Q6ZN16 1313 aa26.42■■□□□ 1.82
PNKP-201ENST00000322344 EXOSC10Q01780 885 aaKnown RBP26.42■■□□□ 1.82
PNKP-201ENST00000322344 HSP90AB3PQ58FF7 597 aa26.42■■□□□ 1.82
PNKP-201ENST00000322344 ZSCAN16Q9H4T2 348 aaPredicted RBP26.42■■□□□ 1.82
PNKP-201ENST00000322344 ASAP1Q9ULH1 1129 aa26.42■■□□□ 1.82
PNKP-201ENST00000322344 JAK2O60674 1132 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 HCLS1P14317 486 aaPredicted RBP26.41■■□□□ 1.82
PNKP-201ENST00000322344 TPRNQ4KMQ1 711 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 TAF7LQ5H9L4 462 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 KIF3AQ9Y496 699 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 HMGN5P82970 282 aaKnown RBP26.41■■□□□ 1.82
PNKP-201ENST00000322344 IFIT5Q13325 482 aaKnown RBP26.41■■□□□ 1.82
PNKP-201ENST00000322344 GIMAP6Q6P9H5 292 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 GIGYF2Q6Y7W6 1299 aaKnown RBP26.41■■□□□ 1.82
PNKP-201ENST00000322344 XAGE2Q96GT9 111 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 SPATA32Q96LK8 384 aa26.41■■□□□ 1.82
PNKP-201ENST00000322344 ZNF330Q9Y3S2 320 aaPredicted RBP26.41■■□□□ 1.82
PNKP-201ENST00000322344 PTMAP06454 111 aaKnown RBP26.4■■□□□ 1.82
PNKP-201ENST00000322344 SCRN1Q12765 414 aa26.4■■□□□ 1.82
PNKP-201ENST00000322344 E7EWF7 191 aa26.39■■□□□ 1.82
PNKP-201ENST00000322344 H3BQV1 296 aa26.39■■□□□ 1.82
PNKP-201ENST00000322344 RESTQ13127 1097 aa26.39■■□□□ 1.82
PNKP-201ENST00000322344 IFFO2Q5TF58 517 aa26.39■■□□□ 1.82
PNKP-201ENST00000322344 CTNNA3Q9UI47 895 aa26.39■■□□□ 1.82
PNKP-201ENST00000322344 GOLGA6L4A6NEF3 574 aa26.39■■□□□ 1.81
PNKP-201ENST00000322344 CCDC192P0DO97 292 aa26.39■■□□□ 1.81
PNKP-201ENST00000322344 LEO1Q8WVC0 666 aaPredicted RBP26.39■■□□□ 1.81
PNKP-201ENST00000322344 FAM89AQ96GI7 184 aa26.39■■□□□ 1.81
PNKP-201ENST00000322344 FAM173BQ6P4H8 233 aa26.38■■□□□ 1.81
PNKP-201ENST00000322344 FKBP4Q02790 459 aaKnown RBP eCLIP26.38■■□□□ 1.81
PNKP-201ENST00000322344 SLFNL1Q499Z3 407 aa26.38■■□□□ 1.81
PNKP-201ENST00000322344 NAA16Q6N069 864 aaPredicted RBP26.38■■□□□ 1.81
PNKP-201ENST00000322344 FBXL16Q8N461 479 aa26.38■■□□□ 1.81
PNKP-201ENST00000322344 NUP62CLQ9H1M0 184 aa26.38■■□□□ 1.81
PNKP-201ENST00000322344 LAMA4Q16363 1823 aa26.37■■□□□ 1.81
PNKP-201ENST00000322344 DISP2A7MBM2 1401 aa26.37■■□□□ 1.81
PNKP-201ENST00000322344 M0R2C6 588 aa26.37■■□□□ 1.81
PNKP-201ENST00000322344 LRRC2Q9BYS8 371 aa26.37■■□□□ 1.81
PNKP-201ENST00000322344 DDX19AQ9NUU7 478 aaKnown RBP26.37■■□□□ 1.81
PNKP-201ENST00000322344 LRP6O75581 1613 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms