RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 RASEFQ8IZ41 740 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
SHISA3-201ENST00000319234 MED23Q9ULK4 1368 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 THSD7AQ9UPZ6 1657 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 MYH14Q7Z406 1995 aaKnown RBP21.87■■□□□ 1.09
SHISA3-201ENST00000319234 MAP4K1Q92918 833 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 UTP14AQ9BVJ6 771 aaKnown RBP21.87■■□□□ 1.09
SHISA3-201ENST00000319234 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
SHISA3-201ENST00000319234 RIPOR2Q9Y4F9 1068 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
SHISA3-201ENST00000319234 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
SHISA3-201ENST00000319234 KBTBD3Q8NAB2 608 aa21.86■■□□□ 1.09
SHISA3-201ENST00000319234 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
SHISA3-201ENST00000319234 UPF3BQ9BZI7 483 aaKnown RBP21.86■■□□□ 1.09
SHISA3-201ENST00000319234 NDUFB9Q9Y6M9 179 aa21.86■■□□□ 1.09
SHISA3-201ENST00000319234 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
SHISA3-201ENST00000319234 HSPA1LP34931 641 aa21.85■■□□□ 1.09
SHISA3-201ENST00000319234 NECTIN1Q15223 517 aa21.85■■□□□ 1.09
SHISA3-201ENST00000319234 LDHAL6AQ6ZMR3 332 aa21.85■■□□□ 1.09
SHISA3-201ENST00000319234 PRPF40BQ6NWY9 871 aaKnown RBP21.85■■□□□ 1.09
SHISA3-201ENST00000319234 GPT2Q8TD30 523 aa21.85■■□□□ 1.09
SHISA3-201ENST00000319234 GJD4Q96KN9 370 aaPredicted RBP21.85■■□□□ 1.09
SHISA3-201ENST00000319234 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
SHISA3-201ENST00000319234 IFIT1P09914 478 aaKnown RBP21.84■■□□□ 1.09
SHISA3-201ENST00000319234 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
SHISA3-201ENST00000319234 ZNF652Q9Y2D9 606 aa21.84■■□□□ 1.09
SHISA3-201ENST00000319234 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
SHISA3-201ENST00000319234 METTL24Q5JXM2 366 aa21.83■■□□□ 1.09
SHISA3-201ENST00000319234 CCDC158Q5M9N0 1113 aa21.83■■□□□ 1.09
SHISA3-201ENST00000319234 XAGE2Q96GT9 111 aa21.83■■□□□ 1.09
SHISA3-201ENST00000319234 MYH3P11055 1940 aa21.83■■□□□ 1.09
SHISA3-201ENST00000319234 CNTNAP4Q9C0A0 1308 aa21.83■■□□□ 1.09
SHISA3-201ENST00000319234 CLEC4GQ6UXB4 293 aa21.83■■□□□ 1.08
SHISA3-201ENST00000319234 PTF1AQ7RTS3 328 aa21.83■■□□□ 1.08
SHISA3-201ENST00000319234 TM6SF1Q9BZW5 370 aa21.83■■□□□ 1.08
SHISA3-201ENST00000319234 CNNM1Q9NRU3 951 aa21.83■■□□□ 1.08
SHISA3-201ENST00000319234 NIP7Q9Y221 180 aaKnown RBP eCLIP21.83■■□□□ 1.08
SHISA3-201ENST00000319234 RIC1Q4ADV7 1423 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 GOLIM4O00461 696 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 HSP90B1P14625 803 aaKnown RBP21.82■■□□□ 1.08
SHISA3-201ENST00000319234 KCNJ4P48050 445 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 GORABQ5T7V8 394 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 FBXO41Q8TF61 875 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 AFF2P51816 1311 aa21.82■■□□□ 1.08
SHISA3-201ENST00000319234 ZKSCAN1P17029 563 aaPredicted RBP21.81■■□□□ 1.08
SHISA3-201ENST00000319234 CREB3L3Q68CJ9 461 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
SHISA3-201ENST00000319234 TTC14Q96N46 770 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 TAF5LO75529 589 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 HCLS1P14317 486 aaPredicted RBP21.81■■□□□ 1.08
SHISA3-201ENST00000319234 ADORA1P30542 326 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 ATP2B3Q16720 1220 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 MCMDC2Q4G0Z9 681 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 TTC39AQ5SRH9 613 aa21.81■■□□□ 1.08
SHISA3-201ENST00000319234 RC3H1Q5TC82 1133 aaKnown RBP21.81■■□□□ 1.08
SHISA3-201ENST00000319234 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
SHISA3-201ENST00000319234 FAM177BA6PVY3 158 aa21.8■■□□□ 1.08
SHISA3-201ENST00000319234 NTSR2O95665 410 aa21.8■■□□□ 1.08
SHISA3-201ENST00000319234 RGL2O15211 777 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 LRSAM1Q6UWE0 723 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 NHSQ6T4R5 1651 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 SLC27A2O14975 620 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
SHISA3-201ENST00000319234 HS1BP3Q53T59 392 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 RNF20Q5VTR2 975 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 ZSWIM6Q9HCJ5 1215 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 HELLSQ9NRZ9 838 aa21.79■■□□□ 1.08
SHISA3-201ENST00000319234 SPEF2Q9C093 1822 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
SHISA3-201ENST00000319234 KCNQ4P56696 695 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
SHISA3-201ENST00000319234 JAKMIP1Q96N16 626 aaKnown RBP21.78■■□□□ 1.08
SHISA3-201ENST00000319234 TRPC5Q9UL62 973 aaPredicted RBP21.78■■□□□ 1.08
SHISA3-201ENST00000319234 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 BCORQ6W2J9 1755 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 ATRNO75882 1429 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 USPL1Q5W0Q7 1092 aa21.78■■□□□ 1.08
SHISA3-201ENST00000319234 BTAF1O14981 1849 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 PDE8BO95263 885 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 ADCK5Q3MIX3 580 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 SYAP1Q96A49 352 aaPredicted RBP21.77■■□□□ 1.08
SHISA3-201ENST00000319234 HMG20BQ9P0W2 317 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 TMEM63CQ9P1W3 806 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 CYP46A1Q9Y6A2 500 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 MROH5Q6ZUA9 1318 aa21.77■■□□□ 1.08
SHISA3-201ENST00000319234 CHGBP05060 677 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 AK2P54819 239 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 CCDC152Q4G0S7 254 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 ZMYM1Q5SVZ6 1142 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 FAM182BQ5T319 152 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 VPS53Q5VIR6 699 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 RBSNQ9H1K0 784 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 LRP5O75197 1615 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 RNF113AO15541 343 aaKnown RBP21.76■■□□□ 1.07
SHISA3-201ENST00000319234 RPS6KA4O75676 772 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 PSMA5P28066 241 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 LRRFIP1Q32MZ4 808 aaKnown RBP21.76■■□□□ 1.07
SHISA3-201ENST00000319234 TSGA10IPQ3SY00 556 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms