RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ECE2O60344 883 aa22.63■■□□□ 1.21
TPM1-203ENST00000317516 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
TPM1-203ENST00000317516 ZC3H15Q8WU90 426 aaKnown RBP22.63■■□□□ 1.21
TPM1-203ENST00000317516 XDHP47989 1333 aa22.62■■□□□ 1.21
TPM1-203ENST00000317516 ATP2B4P23634 1241 aa22.62■■□□□ 1.21
TPM1-203ENST00000317516 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
TPM1-203ENST00000317516 BSDC1Q9NW68 430 aaPredicted RBP22.62■■□□□ 1.21
TPM1-203ENST00000317516 CNTNAP1P78357 1384 aa22.62■■□□□ 1.21
TPM1-203ENST00000317516 PSMD14O00487 310 aa22.61■■□□□ 1.21
TPM1-203ENST00000317516 IFFO2Q5TF58 517 aa22.61■■□□□ 1.21
TPM1-203ENST00000317516 PLA2G12BQ9BX93 195 aa22.61■■□□□ 1.21
TPM1-203ENST00000317516 GREM2Q9H772 168 aa22.61■■□□□ 1.21
TPM1-203ENST00000317516 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
TPM1-203ENST00000317516 DEFB115Q30KQ5 88 aa22.6■■□□□ 1.21
TPM1-203ENST00000317516 MICALL2Q8IY33 904 aa22.6■■□□□ 1.21
TPM1-203ENST00000317516 PGAP2Q9UHJ9 254 aa22.6■■□□□ 1.21
TPM1-203ENST00000317516 ABT1Q9ULW3 272 aaKnown RBP22.6■■□□□ 1.21
TPM1-203ENST00000317516 ZBTB12Q9Y330 459 aaPredicted RBP22.6■■□□□ 1.21
TPM1-203ENST00000317516 RTL9Q8NET4 1388 aa22.6■■□□□ 1.21
TPM1-203ENST00000317516 DUOX1Q9NRD9 1551 aa22.59■■□□□ 1.21
TPM1-203ENST00000317516 ADAMTSL1Q8N6G6 1762 aa22.59■■□□□ 1.21
TPM1-203ENST00000317516 HSPA1AP0DMV8 641 aaKnown RBP22.59■■□□□ 1.21
TPM1-203ENST00000317516 HSPA1BP0DMV9 641 aaKnown RBP22.59■■□□□ 1.21
TPM1-203ENST00000317516 GPR101Q96P66 508 aaPredicted RBP22.59■■□□□ 1.21
TPM1-203ENST00000317516 TAF1P21675 1872 aa22.59■■□□□ 1.21
TPM1-203ENST00000317516 LRRC37AA6NMS7 1700 aa22.59■■□□□ 1.21
TPM1-203ENST00000317516 MINPP1Q9UNW1 487 aa22.58■■□□□ 1.21
TPM1-203ENST00000317516 RASSF10A6NK89 507 aa22.57■■□□□ 1.2
TPM1-203ENST00000317516 VIL1P09327 827 aaKnown RBP22.57■■□□□ 1.2
TPM1-203ENST00000317516 MPHOSPH8Q99549 860 aa22.57■■□□□ 1.2
TPM1-203ENST00000317516 LTBP1Q14766 1721 aa22.57■■□□□ 1.2
TPM1-203ENST00000317516 CSF1RP07333 972 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 ITGA6P23229 1130 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 VEGFBP49765 207 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 HIRAP54198 1017 aaPredicted RBP22.56■■□□□ 1.2
TPM1-203ENST00000317516 CASP7P55210 303 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 CDC37L1Q7L3B6 337 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 KCNQ5Q9NR82 932 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 ZNF521Q96K83 1311 aa22.56■■□□□ 1.2
TPM1-203ENST00000317516 F6X3S4 739 aa22.55■■□□□ 1.2
TPM1-203ENST00000317516 TRAF5O00463 557 aa22.55■■□□□ 1.2
TPM1-203ENST00000317516 BEND3Q5T5X7 828 aa22.55■■□□□ 1.2
TPM1-203ENST00000317516 TRPM4Q8TD43 1214 aa22.55■■□□□ 1.2
TPM1-203ENST00000317516 ANKRD2Q9GZV1 360 aa22.55■■□□□ 1.2
TPM1-203ENST00000317516 LEMD3Q9Y2U8 911 aa22.54■■□□□ 1.2
TPM1-203ENST00000317516 COL4A1P02462 1669 aa22.54■■□□□ 1.2
TPM1-203ENST00000317516 ANKRD18BA2A2Z9 1011 aa22.53■■□□□ 1.2
TPM1-203ENST00000317516 E9PSI1 815 aa22.53■■□□□ 1.2
TPM1-203ENST00000317516 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
TPM1-203ENST00000317516 CST9Q5W186 159 aa22.53■■□□□ 1.2
TPM1-203ENST00000317516 SAMD7Q7Z3H4 446 aa22.53■■□□□ 1.2
TPM1-203ENST00000317516 SHTN1A0MZ66 631 aa22.52■■□□□ 1.2
TPM1-203ENST00000317516 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
TPM1-203ENST00000317516 FAM161AQ3B820 660 aa22.52■■□□□ 1.2
TPM1-203ENST00000317516 TBC1D10BQ4KMP7 808 aaPredicted RBP22.52■■□□□ 1.2
TPM1-203ENST00000317516 RBM26Q5T8P6 1007 aaKnown RBP22.52■■□□□ 1.2
TPM1-203ENST00000317516 AGBL3Q8NEM8 1001 aa22.52■■□□□ 1.2
TPM1-203ENST00000317516 GLIS2Q9BZE0 524 aaPredicted RBP22.52■■□□□ 1.2
TPM1-203ENST00000317516 USP17L3A6NCW0 530 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 USP17L4A6NCW7 530 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 ALDH1L1O75891 902 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 CELF2O95319 508 aaKnown RBP22.51■■□□□ 1.19
TPM1-203ENST00000317516 ECE1P42892 770 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 IFIT5Q13325 482 aaKnown RBP22.51■■□□□ 1.19
TPM1-203ENST00000317516 RSBN1LQ6PCB5 846 aaPredicted RBP22.51■■□□□ 1.19
TPM1-203ENST00000317516 SLC4A10Q6U841 1118 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 USP17L1Q7RTZ2 530 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 AIDAQ96BJ3 306 aa22.51■■□□□ 1.19
TPM1-203ENST00000317516 C9orf78Q9NZ63 289 aaPredicted RBP22.51■■□□□ 1.19
TPM1-203ENST00000317516 MED23Q9ULK4 1368 aa22.5■■□□□ 1.19
TPM1-203ENST00000317516 GRM8O00222 908 aa22.5■■□□□ 1.19
TPM1-203ENST00000317516 COL13A1Q5TAT6 717 aaPredicted RBP22.5■■□□□ 1.19
TPM1-203ENST00000317516 PAXIP1Q6ZW49 1069 aaPredicted RBP22.5■■□□□ 1.19
TPM1-203ENST00000317516 DCPSQ96C86 337 aaKnown RBP22.5■■□□□ 1.19
TPM1-203ENST00000317516 SRCIN1Q9C0H9 1055 aa22.5■■□□□ 1.19
TPM1-203ENST00000317516 COA1Q9GZY4 146 aa22.5■■□□□ 1.19
TPM1-203ENST00000317516 TLL2Q9Y6L7 1015 aa22.5■■□□□ 1.19
TPM1-203ENST00000317516 WDR33Q9C0J8 1336 aaKnown RBP22.5■■□□□ 1.19
TPM1-203ENST00000317516 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
TPM1-203ENST00000317516 CHMP3Q9Y3E7 222 aa22.49■■□□□ 1.19
TPM1-203ENST00000317516 KCNJ4P48050 445 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 FOXO4P98177 505 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 MAP2K1Q02750 393 aaPredicted RBP22.48■■□□□ 1.19
TPM1-203ENST00000317516 KIF4BQ2VIQ3 1234 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 KRT26Q7Z3Y9 468 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 ZNF408Q9H9D4 720 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 ZNF804BA4D1E1 1349 aa22.48■■□□□ 1.19
TPM1-203ENST00000317516 CACNA1FO60840 1977 aa22.47■■□□□ 1.19
TPM1-203ENST00000317516 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
TPM1-203ENST00000317516 ZNF280AP59817 542 aaPredicted RBP22.47■■□□□ 1.19
TPM1-203ENST00000317516 CCDC57Q2TAC2 916 aa22.47■■□□□ 1.19
TPM1-203ENST00000317516 LMBR1LQ6UX01 489 aa22.47■■□□□ 1.19
TPM1-203ENST00000317516 CAPNS2Q96L46 248 aa22.47■■□□□ 1.19
TPM1-203ENST00000317516 WTIPA6NIX2 430 aaPredicted RBP22.46■■□□□ 1.19
TPM1-203ENST00000317516 CCER2I3L3R5 266 aa22.46■■□□□ 1.19
TPM1-203ENST00000317516 CHRNDQ07001 517 aa22.46■■□□□ 1.19
TPM1-203ENST00000317516 SLFN5Q08AF3 891 aa22.46■■□□□ 1.19
TPM1-203ENST00000317516 TAF7LQ5H9L4 462 aa22.46■■□□□ 1.19
TPM1-203ENST00000317516 SAPCD2Q86UD0 394 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms