RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 DLK2Q6UY11 383 aa22.54■■□□□ 1.2
EXOSC4-201ENST00000316052 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
EXOSC4-201ENST00000316052 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
EXOSC4-201ENST00000316052 AOC2O75106 756 aa22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 EGFRP00533 1210 aa22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 CDC37L1Q7L3B6 337 aa22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 CCDC85AQ96PX6 553 aaPredicted RBP22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 EYA3Q99504 573 aa22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 PODXL2Q9NZ53 605 aa22.53■■□□□ 1.2
EXOSC4-201ENST00000316052 PDE8AO60658 829 aa22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 TBC1D10BQ4KMP7 808 aaPredicted RBP22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 USP48Q86UV5 1035 aa22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 ZNF408Q9H9D4 720 aa22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 MAP3K2Q9Y2U5 619 aa22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 THSD7BQ9C0I4 1608 aa22.52■■□□□ 1.2
EXOSC4-201ENST00000316052 DDX58O95786 925 aaKnown RBP22.51■■□□□ 1.19
EXOSC4-201ENST00000316052 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
EXOSC4-201ENST00000316052 ZC3H12CQ9C0D7 883 aaKnown RBP22.51■■□□□ 1.19
EXOSC4-201ENST00000316052 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 UFL1O94874 794 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 ANKIB1Q9P2G1 1089 aa22.5■■□□□ 1.19
EXOSC4-201ENST00000316052 VIL1P09327 827 aaKnown RBP22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 RPS12P25398 132 aaKnown RBP22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 MAP2K2P36507 400 aa22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 RBM26Q5T8P6 1007 aaKnown RBP22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 GGA1Q9UJY5 639 aa22.49■■□□□ 1.19
EXOSC4-201ENST00000316052 WWC1Q8IX03 1113 aa22.48■■□□□ 1.19
EXOSC4-201ENST00000316052 HHIPL1Q96JK4 782 aa22.48■■□□□ 1.19
EXOSC4-201ENST00000316052 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
EXOSC4-201ENST00000316052 G2E3Q7L622 706 aa22.47■■□□□ 1.19
EXOSC4-201ENST00000316052 WTIPA6NIX2 430 aaPredicted RBP22.46■■□□□ 1.19
EXOSC4-201ENST00000316052 KRT26Q7Z3Y9 468 aa22.46■■□□□ 1.19
EXOSC4-201ENST00000316052 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
EXOSC4-201ENST00000316052 BEGAINQ9BUH8 593 aa22.46■■□□□ 1.19
EXOSC4-201ENST00000316052 TSKSQ9UJT2 592 aa22.46■■□□□ 1.19
EXOSC4-201ENST00000316052 CWF19L2Q2TBE0 894 aaKnown RBP22.45■■□□□ 1.18
EXOSC4-201ENST00000316052 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
EXOSC4-201ENST00000316052 G3V3G9 751 aa22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 CTSWP56202 376 aa22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 TWISTNBQ3B726 338 aaPredicted RBP22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 DCAF8Q5TAQ9 597 aa22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 ZIC5Q96T25 663 aa22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 STK31Q9BXU1 1019 aa22.44■■□□□ 1.18
EXOSC4-201ENST00000316052 ASTN2O75129 1339 aaPredicted RBP22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 XDHP47989 1333 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 NEURL1BA8MQ27 555 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 ADM5C9JUS6 153 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 SLC4A2P04920 1241 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 HUNKP57058 714 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 KIF4BQ2VIQ3 1234 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 GREM2Q9H772 168 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 MYH3P11055 1940 aa22.43■■□□□ 1.18
EXOSC4-201ENST00000316052 DCPSQ96C86 337 aaKnown RBP22.42■■□□□ 1.18
EXOSC4-201ENST00000316052 H7C1W4 665 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 ATP2B4P23634 1241 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 NEXNQ0ZGT2 675 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 GMLQ99445 158 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 MINPP1Q9UNW1 487 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 CASP8AP2Q9UKL3 1982 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 PSME4Q14997 1843 aa22.41■■□□□ 1.18
EXOSC4-201ENST00000316052 BRPF1P55201 1214 aaPredicted RBP22.4■■□□□ 1.18
EXOSC4-201ENST00000316052 AGBL3Q8NEM8 1001 aa22.4■■□□□ 1.18
EXOSC4-201ENST00000316052 ABHD8Q96I13 439 aa22.4■■□□□ 1.18
EXOSC4-201ENST00000316052 BSDC1Q9NW68 430 aaPredicted RBP22.4■■□□□ 1.18
EXOSC4-201ENST00000316052 IL16Q14005 1332 aa22.39■■□□□ 1.18
EXOSC4-201ENST00000316052 SPEF2Q9C093 1822 aa22.39■■□□□ 1.17
EXOSC4-201ENST00000316052 UBE3BQ7Z3V4 1068 aa22.39■■□□□ 1.17
EXOSC4-201ENST00000316052 GBA2Q9HCG7 927 aaPredicted RBP22.39■■□□□ 1.17
EXOSC4-201ENST00000316052 GGA3Q9NZ52 723 aa22.39■■□□□ 1.17
EXOSC4-201ENST00000316052 SCARF1Q14162 830 aa22.38■■□□□ 1.17
EXOSC4-201ENST00000316052 PODNQ7Z5L7 613 aa22.38■■□□□ 1.17
EXOSC4-201ENST00000316052 ZNF609O15014 1411 aa22.38■■□□□ 1.17
EXOSC4-201ENST00000316052 USP17L3A6NCW0 530 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 USP17L4A6NCW7 530 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 FAM155AB1AL88 458 aaPredicted RBP22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 FLIIQ13045 1269 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 NOGQ13253 232 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 GCKRQ14397 625 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 RGMBQ6NW40 437 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 USP17L1Q7RTZ2 530 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 C2orf69Q8N8R5 385 aa22.37■■□□□ 1.17
EXOSC4-201ENST00000316052 CA12O43570 354 aa22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 CASP7P55210 303 aa22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 SULF1Q8IWU6 871 aa22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 MRS2Q9HD23 443 aa22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 CACNA1FO60840 1977 aa22.36■■□□□ 1.17
EXOSC4-201ENST00000316052 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 USP17L8P0C7I0 530 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms