RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 USP6P35125 1406 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 SH3TC1Q8TE82 1336 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 IFIT1BQ5T764 474 aaKnown RBP14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CNNM3Q8NE01 707 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 FAM89AQ96GI7 184 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CCNL1Q9UK58 526 aaPredicted RBP14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 NECAB1Q8N987 351 aa14.85□□□□□ -0.03
SH3PXD2A-201ENST00000315994 UBE2HP62256 183 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CFAP100Q494V2 611 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 PDE8AO60658 829 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 RAB11FIP4Q86YS3 637 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 HELBQ8NG08 1087 aaPredicted RBP14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 PYM1Q9BRP8 204 aaKnown RBP14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 HELLSQ9NRZ9 838 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 TFIP11Q9UBB9 837 aaKnown RBP14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 PHKG2P15735 406 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 PAF1Q8N7H5 531 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 ITGA6P23229 1130 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 TNNI3KQ59H18 835 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CREB3L3Q68CJ9 461 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 CCDC87Q9NVE4 849 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 HDAC9Q9UKV0 1011 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 FPGT-TNNI3KV9GXZ4 949 aa14.84□□□□□ -0.03
SH3PXD2A-201ENST00000315994 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.03
SH3PXD2A-201ENST00000315994 RNF123Q5XPI4 1314 aa14.83□□□□□ -0.03
SH3PXD2A-201ENST00000315994 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ERCC4Q92889 916 aaPredicted RBP14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 LRRC2Q9BYS8 371 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MYO6Q9UM54 1294 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MAP3K4Q9Y6R4 1608 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 A1BGP04217 495 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RTN1Q16799 776 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MAGEB6Q8N7X4 407 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CROCC2H7BZ55 1655 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KDM2BQ8NHM5 1336 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CDR1P51861 262 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 GCKRQ14397 625 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CLTCL1P53675 1640 aa14.83□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PRC1O43663 620 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PLCG2P16885 1265 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 EIF5P55010 431 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 IL17REQ8NFR9 667 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RBM17Q96I25 401 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PDCL3Q9H2J4 239 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RBM25P49756 843 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 TCEANC2Q96MN5 208 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 FEZ1Q99689 392 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 TSG101Q99816 390 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PPP1R12BO60237 982 aaPredicted RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RDXP35241 583 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 GNAQP50148 359 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 HSP90B2PQ58FF3 399 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 A0A1B0GUL7 405 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 NOM1Q5C9Z4 860 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 SUCLG2Q96I99 432 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 USP26Q9BXU7 913 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ZC3H12CQ9C0D7 883 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ABCC4O15439 1325 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 VAT1LQ9HCJ6 419 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 NSFL1CQ9UNZ2 370 aaKnown RBP14.82□□□□□ -0.04
SH3PXD2A-201ENST00000315994 PUM3Q15397 648 aaKnown RBP14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KLHL40Q2TBA0 621 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 MPNDQ8N594 471 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ALG1Q9BT22 464 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CNBD1Q8NA66 436 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 DNAJC10Q8IXB1 793 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CKAP2LQ8IYA6 745 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 EYA3Q99504 573 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KANK3Q6NY19 840 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KIF20AO95235 890 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CALM1P0DP23 149 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CALM2P0DP24 149 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CALM3P0DP25 149 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CALML4Q96GE6 196 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 BMP15O95972 392 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 NBPF14Q5TI25 921 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 ZNF397Q8NF99 534 aaPredicted RBP14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 CCDC148Q8NFR7 591 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 FGFR1OPO95684 399 aaKnown RBP14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 NBPF7P0C2Y1 421 aaPredicted RBP14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 STX1AQ16623 288 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 F8W031 263 aaPredicted RBP14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 AMPD3Q01432 767 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 IGSF1Q8N6C5 1336 aa14.8□□□□□ -0.04
SH3PXD2A-201ENST00000315994 AK2P54819 239 aa14.79□□□□□ -0.04
SH3PXD2A-201ENST00000315994 KLHL10Q6JEL2 608 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms