RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 AKAP4Q5JQC9 854 aa22.27■■□□□ 1.16
HERPUD2-201ENST00000311350 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
HERPUD2-201ENST00000311350 TTC6Q86TZ1 520 aa22.27■■□□□ 1.16
HERPUD2-201ENST00000311350 DISP2A7MBM2 1401 aa22.27■■□□□ 1.16
HERPUD2-201ENST00000311350 ZNF75DP51815 510 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 ARID5BQ14865 1188 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 EVI5LQ96CN4 794 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 ZNF215Q9UL58 517 aaPredicted RBP22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 TRIM37O94972 964 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 CASTP20810 708 aaKnown RBP22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 MAP3K11Q16584 847 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 FERMT3Q86UX7 667 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 KRT222Q8N1A0 295 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 PLCD3Q8N3E9 789 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 PDRG1Q9NUG6 133 aa22.26■■□□□ 1.15
HERPUD2-201ENST00000311350 DBF4Q9UBU7 674 aaPredicted RBP22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 PAXBP1Q9Y5B6 917 aa22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 CYP46A1Q9Y6A2 500 aa22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 CEP135Q66GS9 1140 aa22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 NUP62CLQ9H1M0 184 aa22.25■■□□□ 1.15
HERPUD2-201ENST00000311350 PLA2G4DQ86XP0 818 aa22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 HEG1Q9ULI3 1381 aa22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 CDK11BP21127 795 aaKnown RBP22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 ST3GAL1Q11201 340 aa22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 OS9Q13438 667 aaPredicted RBP22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 NECTIN1Q15223 517 aa22.24■■□□□ 1.15
HERPUD2-201ENST00000311350 AMOTQ4VCS5 1084 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 ALDH8A1Q9H2A2 487 aaPredicted RBP22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 NPHP1O15259 732 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 FBXO38Q6PIJ6 1188 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 NECAB1Q8N987 351 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 UTYO14607 1347 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 CCDC171Q6TFL3 1326 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
HERPUD2-201ENST00000311350 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 JAKMIP1Q96N16 626 aaKnown RBP22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 TRERF1Q96PN7 1200 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 LGR6Q9HBX8 967 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 DACT1Q9NYF0 836 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 ZKSCAN1P17029 563 aaPredicted RBP22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 TEFQ10587 303 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 ZNF397Q8NF99 534 aaPredicted RBP22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 CLIP2Q9UDT6 1046 aa22.22■■□□□ 1.15
HERPUD2-201ENST00000311350 BTBD11A6QL63 1104 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 EXOC5O00471 708 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 PTH1RQ03431 593 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 ELF2Q15723 593 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 ADCK5Q3MIX3 580 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 KSR2Q6VAB6 950 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 IFIT2P09913 472 aaKnown RBP22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 PSMA5P28066 241 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 EN1Q05925 392 aaPredicted RBP22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 TNMDQ9H2S6 317 aa22.21■■□□□ 1.15
HERPUD2-201ENST00000311350 IL2RBP14784 551 aa22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 TIGD1Q96MW7 591 aa22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 ELP1O95163 1332 aa22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 PRPF40BQ6NWY9 871 aaKnown RBP22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 DNAJC25Q9H1X3 360 aa22.2■■□□□ 1.14
HERPUD2-201ENST00000311350 CCDC66A2RUB6 948 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 CAPN2P17655 700 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 CDC37L1Q7L3B6 337 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 MAP4K1Q92918 833 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 FAM53CQ9NYF3 392 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 TFIP11Q9UBB9 837 aaKnown RBP22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 TNS1Q9HBL0 1735 aaKnown RBP22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 PDCP20941 246 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 ANKRD1Q15327 319 aa22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 IPO4Q8TEX9 1081 aaKnown RBP22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 C9orf78Q9NZ63 289 aaPredicted RBP22.19■■□□□ 1.14
HERPUD2-201ENST00000311350 TNS2Q63HR2 1409 aa22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 APBA3O96018 575 aa22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 COL9A3Q14050 684 aaPredicted RBP22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 ZNF446Q9NWS9 450 aa22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 TRMT1Q9NXH9 659 aaKnown RBP22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 CREB3L3Q68CJ9 461 aa22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 MAP3K2Q9Y2U5 619 aa22.18■■□□□ 1.14
HERPUD2-201ENST00000311350 KCNQ3O43525 872 aa22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 ME3Q16798 604 aa22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 RBM8AQ9Y5S9 174 aaKnown RBP22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 MRC1P22897 1456 aa22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 LINS1Q8NG48 757 aa22.17■■□□□ 1.14
HERPUD2-201ENST00000311350 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 ZNF165P49910 485 aa22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 TDRD7Q8NHU6 1098 aaKnown RBP22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 BCL9O00512 1426 aa22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 LARP1BQ659C4 914 aaKnown RBP22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 LRRC8AQ8IWT6 810 aa22.16■■□□□ 1.14
HERPUD2-201ENST00000311350 KRT85P78386 507 aa22.15■■□□□ 1.14
HERPUD2-201ENST00000311350 TSGA10IPQ3SY00 556 aa22.15■■□□□ 1.14
HERPUD2-201ENST00000311350 RNF20Q5VTR2 975 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms