RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 MPHOSPH8Q99549 860 aa11.37□□□□□ -0.59
PDE4D-201ENST00000309641 POLLQ9UGP5 575 aa11.37□□□□□ -0.59
PDE4D-201ENST00000309641 TAF5LO75529 589 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 MTX1Q13505 466 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 MPNDQ8N594 471 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 SIL1Q9H173 461 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 TAOK3Q9H2K8 898 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 COL4A5P29400 1685 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDE4D-201ENST00000309641 CHRNDQ07001 517 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
PDE4D-201ENST00000309641 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 LTBP1Q14766 1721 aa11.36□□□□□ -0.59
PDE4D-201ENST00000309641 SBF1O95248 1867 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 CCDC88AQ3V6T2 1871 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 C9orf131Q5VYM1 1079 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 EXOC6Q8TAG9 804 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 PSMD1Q99460 953 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-201ENST00000309641 RNF181Q9P0P0 153 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
PDE4D-201ENST00000309641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-201ENST00000309641 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 LMNB1P20700 586 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 KLRK1P26718 216 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 POLA2Q14181 598 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 AOC3Q16853 763 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
PDE4D-201ENST00000309641 EYA2O00167 538 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 UFL1O94874 794 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 TXNRD3Q86VQ6 643 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 SSH3Q8TE77 659 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-201ENST00000309641 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 XDHP47989 1333 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 GGA1Q9UJY5 639 aa11.33□□□□□ -0.6
PDE4D-201ENST00000309641 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
PDE4D-201ENST00000309641 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
PDE4D-201ENST00000309641 CHD4Q14839 1912 aa11.32□□□□□ -0.6
PDE4D-201ENST00000309641 PPIP5K2O43314 1243 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 ZNF804BA4D1E1 1349 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 GRIPAP1Q4V328 841 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
PDE4D-201ENST00000309641 SASH1O94885 1247 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 KIAA2012Q0VF49 1180 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
PDE4D-201ENST00000309641 CIAO1O76071 339 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 PDE8BO95263 885 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 TFCP2Q12800 502 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-201ENST00000309641 LEMD3Q9Y2U8 911 aa11.3□□□□□ -0.6
PDE4D-201ENST00000309641 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
PDE4D-201ENST00000309641 KCNJ4P48050 445 aa11.29□□□□□ -0.6
PDE4D-201ENST00000309641 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
PDE4D-201ENST00000309641 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
PDE4D-201ENST00000309641 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
PDE4D-201ENST00000309641 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
PDE4D-201ENST00000309641 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
PDE4D-201ENST00000309641 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
PDE4D-201ENST00000309641 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
PDE4D-201ENST00000309641 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
PDE4D-201ENST00000309641 APBB1O00213 710 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 FGFR2P21802 821 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 GYG1P46976 350 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDE4D-201ENST00000309641 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
PDE4D-201ENST00000309641 MED23Q9ULK4 1368 aa11.27□□□□□ -0.6
PDE4D-201ENST00000309641 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 FZD9O00144 591 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 ECE2O60344 883 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 RAD17O75943 681 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms