RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SERPINA10Q9UK55 444 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 SUGT1Q9Y2Z0 365 aa10.29□□□□□ -0.76
CHD6-201ENST00000309279 UTYO14607 1347 aa10.28□□□□□ -0.76
CHD6-201ENST00000309279 KCNA3P22001 575 aa10.28□□□□□ -0.76
CHD6-201ENST00000309279 CRY2Q49AN0 593 aa10.28□□□□□ -0.76
CHD6-201ENST00000309279 FTSJ3Q8IY81 847 aaKnown RBP10.28□□□□□ -0.76
CHD6-201ENST00000309279 BRCA1P38398 1863 aaKnown RBP10.28□□□□□ -0.76
CHD6-201ENST00000309279 LAMB2P55268 1798 aa10.27□□□□□ -0.76
CHD6-201ENST00000309279 DLEC1Q9Y238 1755 aa10.27□□□□□ -0.76
CHD6-201ENST00000309279 TNRC6CQ9HCJ0 1690 aaKnown RBP10.27□□□□□ -0.76
CHD6-201ENST00000309279 ANKRD62A6NC57 917 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 GRM8O00222 908 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 IRS4O14654 1257 aaPredicted RBP10.27□□□□□ -0.77
CHD6-201ENST00000309279 SRGNP10124 158 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 NLGN2Q8NFZ4 835 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 NLRP3Q96P20 1036 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 PLA2G12BQ9BX93 195 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 USP44Q9H0E7 712 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 TNNQ9UQP3 1299 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 MYH3P11055 1940 aa10.27□□□□□ -0.77
CHD6-201ENST00000309279 H0YIN7 160 aa10.26□□□□□ -0.77
CHD6-201ENST00000309279 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 RTL5Q5HYW3 569 aaPredicted RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 UBE3BQ7Z3V4 1068 aa10.26□□□□□ -0.77
CHD6-201ENST00000309279 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 CCDC97Q96F63 343 aaPredicted RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 C9orf78Q9NZ63 289 aaPredicted RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 RBM27Q9P2N5 1060 aaKnown RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 COL11A2P13942 1736 aaPredicted RBP10.26□□□□□ -0.77
CHD6-201ENST00000309279 A0A0G2JLW4 131 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 PDE8AO60658 829 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 NBPF7P0C2Y1 421 aaPredicted RBP10.25□□□□□ -0.77
CHD6-201ENST00000309279 MS4A1P11836 297 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 RLBP1P12271 317 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 DPEP1P16444 411 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 CHRNA5P30532 468 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 HOXA10P31260 410 aaPredicted RBP10.25□□□□□ -0.77
CHD6-201ENST00000309279 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 C2CD5Q86YS7 1000 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
CHD6-201ENST00000309279 JARID2Q92833 1246 aaPredicted RBP10.25□□□□□ -0.77
CHD6-201ENST00000309279 PLIN1O60240 522 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 NPR1P16066 1061 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 STYK1Q6J9G0 422 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 TMEM57Q8N5G2 664 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 MASTLQ96GX5 879 aa10.25□□□□□ -0.77
CHD6-201ENST00000309279 CSF1RP07333 972 aa10.24□□□□□ -0.77
CHD6-201ENST00000309279 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
CHD6-201ENST00000309279 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
CHD6-201ENST00000309279 TTLL11Q8NHH1 800 aa10.24□□□□□ -0.77
CHD6-201ENST00000309279 KAZALD1Q96I82 304 aa10.24□□□□□ -0.77
CHD6-201ENST00000309279 PIM2Q9P1W9 311 aa10.24□□□□□ -0.77
CHD6-201ENST00000309279 ALDH1B1P30837 517 aa10.23□□□□□ -0.77
CHD6-201ENST00000309279 RRP1P56182 461 aaKnown RBP10.23□□□□□ -0.77
CHD6-201ENST00000309279 FOXO4P98177 505 aa10.23□□□□□ -0.77
CHD6-201ENST00000309279 PANK1Q8TE04 598 aa10.23□□□□□ -0.77
CHD6-201ENST00000309279 CRAMP1Q96RY5 1269 aa10.23□□□□□ -0.77
CHD6-201ENST00000309279 ZBTB7BO15156 539 aaPredicted RBP10.22□□□□□ -0.77
CHD6-201ENST00000309279 CTSWP56202 376 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 TTLL6Q8N841 843 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 RPGRQ92834 1020 aaKnown RBP10.22□□□□□ -0.77
CHD6-201ENST00000309279 CNKSR1Q969H4 720 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 RBM17Q96I25 401 aaKnown RBP10.22□□□□□ -0.77
CHD6-201ENST00000309279 MEIS3Q99687 375 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 HDAC5Q9UQL6 1122 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 SLX4Q8IY92 1834 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 ARFGEF1Q9Y6D6 1849 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 TAF1P21675 1872 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 RTL9Q8NET4 1388 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 GNAI3P08754 354 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
CHD6-201ENST00000309279 RABL6Q3YEC7 729 aaPredicted RBP10.22□□□□□ -0.77
CHD6-201ENST00000309279 CCDC152Q4G0S7 254 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 EPHA10Q5JZY3 1008 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 NME8Q8N427 588 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 ZNF622Q969S3 477 aaKnown RBP eCLIP10.22□□□□□ -0.771e-6■■■□□ 16.2
CHD6-201ENST00000309279 SUCLG2Q96I99 432 aa10.22□□□□□ -0.77
CHD6-201ENST00000309279 UBTFL1P0CB47 393 aaPredicted RBP10.21□□□□□ -0.78
CHD6-201ENST00000309279 DALRD3Q5D0E6 543 aaKnown RBP10.21□□□□□ -0.78
CHD6-201ENST00000309279 DDX46Q7L014 1031 aaKnown RBP10.21□□□□□ -0.78
CHD6-201ENST00000309279 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.78
CHD6-201ENST00000309279 C7orf43Q8WVR3 580 aa10.21□□□□□ -0.78
CHD6-201ENST00000309279 DRC1Q96MC2 740 aa10.21□□□□□ -0.78
CHD6-201ENST00000309279 CACNA1SQ13698 1873 aa10.21□□□□□ -0.78
CHD6-201ENST00000309279 PATL2C9JE40 543 aaKnown RBP10.2□□□□□ -0.78
CHD6-201ENST00000309279 BBOX1O75936 387 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 FAM193AP78312 1265 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 GRAPQ13588 217 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 PRPF40BQ6NWY9 871 aaKnown RBP10.2□□□□□ -0.78
CHD6-201ENST00000309279 LMBR1LQ6UX01 489 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 ANKRD44Q8N8A2 993 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 GRAPLQ8TC17 118 aaPredicted RBP10.2□□□□□ -0.78
CHD6-201ENST00000309279 BICC1Q9H694 974 aaKnown RBP10.2□□□□□ -0.78
CHD6-201ENST00000309279 GREM2Q9H772 168 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 DDX19BQ9UMR2 479 aa10.2□□□□□ -0.78
CHD6-201ENST00000309279 COG6Q9Y2V7 657 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms