RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 DDX19AQ9NUU7 478 aaKnown RBP19.55■□□□□ 0.72
SSH3-201ENST00000308127 NLRP2Q9NX02 1062 aa19.55■□□□□ 0.72
SSH3-201ENST00000308127 GOLIM4O00461 696 aa19.55■□□□□ 0.72
SSH3-201ENST00000308127 ZSCAN20P17040 1043 aaPredicted RBP19.55■□□□□ 0.72
SSH3-201ENST00000308127 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
SSH3-201ENST00000308127 TIMM10P62072 90 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 PTPN12Q05209 780 aaKnown RBP19.54■□□□□ 0.72
SSH3-201ENST00000308127 SMAP1Q8IYB5 467 aaPredicted RBP19.54■□□□□ 0.72
SSH3-201ENST00000308127 AMOTQ4VCS5 1084 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 CCAR1Q8IX12 1150 aaKnown RBP19.54■□□□□ 0.72
SSH3-201ENST00000308127 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
SSH3-201ENST00000308127 NPHP1O15259 732 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 HSP90AB3PQ58FF7 597 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 USP28Q96RU2 1077 aa19.54■□□□□ 0.72
SSH3-201ENST00000308127 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
SSH3-201ENST00000308127 GJB4Q9NTQ9 266 aa19.53■□□□□ 0.72
SSH3-201ENST00000308127 KDM3BQ7LBC6 1761 aa19.53■□□□□ 0.72
SSH3-201ENST00000308127 NCBP1Q09161 790 aaKnown RBP19.53■□□□□ 0.72
SSH3-201ENST00000308127 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
SSH3-201ENST00000308127 MED1Q15648 1581 aaPredicted RBP19.52■□□□□ 0.72
SSH3-201ENST00000308127 A0A087WZG4 1122 aa19.52■□□□□ 0.72
SSH3-201ENST00000308127 GOLGA6L19H0YKK7 550 aa19.52■□□□□ 0.72
SSH3-201ENST00000308127 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
SSH3-201ENST00000308127 CTDNEP1O95476 244 aa19.52■□□□□ 0.71
SSH3-201ENST00000308127 ANKRD13DQ6ZTN6 518 aa19.52■□□□□ 0.71
SSH3-201ENST00000308127 ANKARQ7Z5J8 1434 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 PTPDC1A2A3K4 754 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 TDRD7Q8NHU6 1098 aaKnown RBP19.51■□□□□ 0.71
SSH3-201ENST00000308127 ZNF594Q96JF6 807 aaPredicted RBP19.51■□□□□ 0.71
SSH3-201ENST00000308127 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
SSH3-201ENST00000308127 ME1P48163 572 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 HAND2P61296 217 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 LMBR1LQ6UX01 489 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 FMNL2Q96PY5 1086 aa19.51■□□□□ 0.71
SSH3-201ENST00000308127 HMG20BQ9P0W2 317 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 BECN2A8MW95 431 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 TPM3P06753 285 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 NSUN7Q8NE18 718 aaKnown RBP19.5■□□□□ 0.71
SSH3-201ENST00000308127 CHMP4AQ9BY43 222 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 SNRKQ9NRH2 765 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 NFAT5O94916 1531 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 RFX5P48382 616 aaPredicted RBP19.5■□□□□ 0.71
SSH3-201ENST00000308127 MCMDC2Q4G0Z9 681 aa19.5■□□□□ 0.71
SSH3-201ENST00000308127 METTL22Q9BUU2 404 aaPredicted RBP19.5■□□□□ 0.71
SSH3-201ENST00000308127 BIN1O00499 593 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 ATP5JP18859 108 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 HDAC5Q9UQL6 1122 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 A0A1B0GVL5 298 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 ADD1P35611 737 aaKnown RBP19.49■□□□□ 0.71
SSH3-201ENST00000308127 IQCB1Q15051 598 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 UTYO14607 1347 aa19.49■□□□□ 0.71
SSH3-201ENST00000308127 POLR3DP05423 398 aaPredicted RBP19.48■□□□□ 0.71
SSH3-201ENST00000308127 AOPEPQ8N6M6 819 aa19.48■□□□□ 0.71
SSH3-201ENST00000308127 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
SSH3-201ENST00000308127 PTPN21Q16825 1174 aa19.48■□□□□ 0.71
SSH3-201ENST00000308127 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
SSH3-201ENST00000308127 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
SSH3-201ENST00000308127 ARHGAP23Q9P227 1491 aa19.47■□□□□ 0.71
SSH3-201ENST00000308127 USPL1Q5W0Q7 1092 aa19.47■□□□□ 0.71
SSH3-201ENST00000308127 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
SSH3-201ENST00000308127 ANKRD7Q92527 254 aa19.47■□□□□ 0.71
SSH3-201ENST00000308127 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
SSH3-201ENST00000308127 CSB-PGBD3P0DP91 1061 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 DMTNQ08495 405 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 KRT32Q14532 448 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 CCDC112Q8NEF3 446 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
SSH3-201ENST00000308127 CTIFO43310 598 aaKnown RBP19.46■□□□□ 0.71
SSH3-201ENST00000308127 SKILP12757 684 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 CCDC73Q6ZRK6 1079 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 LRRC8AQ8IWT6 810 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 SLC52A2Q9HAB3 445 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 COPRSQ9NQ92 184 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 CFAP45Q9UL16 551 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
SSH3-201ENST00000308127 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
SSH3-201ENST00000308127 SLIT1O75093 1534 aa19.45■□□□□ 0.7
SSH3-201ENST00000308127 CCDC69A6NI79 296 aa19.45■□□□□ 0.7
SSH3-201ENST00000308127 KINO60870 393 aaKnown RBP19.45■□□□□ 0.7
SSH3-201ENST00000308127 SNW1Q13573 536 aaKnown RBP19.45■□□□□ 0.7
SSH3-201ENST00000308127 CEP135Q66GS9 1140 aa19.45■□□□□ 0.7
SSH3-201ENST00000308127 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
SSH3-201ENST00000308127 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
SSH3-201ENST00000308127 KIF13AQ9H1H9 1805 aa19.44■□□□□ 0.7
SSH3-201ENST00000308127 TSGA10IPQ3SY00 556 aa19.44■□□□□ 0.7
SSH3-201ENST00000308127 HAUS7Q99871 368 aa19.44■□□□□ 0.7
SSH3-201ENST00000308127 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSH3-201ENST00000308127 DHX32Q7L7V1 743 aaKnown RBP19.44■□□□□ 0.7
SSH3-201ENST00000308127 DHX40Q8IX18 779 aaKnown RBP19.44■□□□□ 0.7
SSH3-201ENST00000308127 SDF4Q9BRK5 362 aa19.44■□□□□ 0.7
SSH3-201ENST00000308127 SMTNL1A8MU46 457 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 E7EWF7 191 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 STX1AQ16623 288 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
SSH3-201ENST00000308127 PAG1Q9NWQ8 432 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 PFKFB2O60825 505 aa19.43■□□□□ 0.7
SSH3-201ENST00000308127 KBTBD3Q8NAB2 608 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms