RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 ADAMTS7Q9UKP4 1686 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 F6X3S4 739 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 HMGB2P26583 209 aaKnown RBP3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ZSCAN23Q3MJ62 389 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 CAPN12Q6ZSI9 719 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ROBO1Q9Y6N7 1651 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 KMT5BQ4FZB7 885 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 PIBF1Q8WXW3 757 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 SETDB2Q96T68 719 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 CYLDQ9NQC7 956 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 FANCLQ9NW38 375 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 CHMP5Q9NZZ3 219 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 TMEM63CQ9P1W3 806 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 RSPH14Q9UHP6 348 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 GGT7Q9UJ14 662 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 CCDC61Q9Y6R9 512 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 FOSP01100 380 aaPredicted RBP3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 KRT18P05783 430 aaKnown RBP3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 HDGFP51858 240 aaKnown RBP3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ATP2B2Q01814 1243 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 NBPF20Q3BBV1 942 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ANKMY2Q8IV38 441 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ASB16Q96NS5 453 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 EXOC6BQ9Y2D4 811 aa3.88□□□□□ -1.79
RAPGEF6-202ENST00000308008 IGF1RP08069 1367 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 EIF3AQ14152 1382 aaKnown RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PARD3Q8TEW0 1356 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 CCDC172P0C7W6 258 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 KLHL40Q2TBA0 621 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 OXLD1Q5BKU9 147 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 EFCAB2Q5VUJ9 269 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 TRIM44Q96DX7 344 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 CUEDC1Q9NWM3 386 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PREX2Q70Z35 1606 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PHF14O94880 888 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 ATF3P18847 181 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 MCM5P33992 734 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 USP48Q86UV5 1035 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 RNF135Q8IUD6 432 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 FEZ1Q99689 392 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 MTA3Q9BTC8 594 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 GNL3LQ9NVN8 582 aaKnown RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 FBXO9Q9UK97 447 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 COMMD10Q9Y6G5 202 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 NRDCO43847 1150 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 C7P10643 843 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 HCLS1P14317 486 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 FOXK1P85037 733 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 SF3B2Q13435 895 aaKnown RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 NOLC1Q14978 699 aaKnown RBP eCLIP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 SART3Q15020 963 aaKnown RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PPP2R5AQ15172 486 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 REXO1L1PQ8IX06 675 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 PDCL2Q8N4E4 241 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 TMUB1Q9BVT8 246 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 SMC4Q9NTJ3 1288 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 DONSONQ9NYP3 566 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 TNNQ9UQP3 1299 aa3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 BRD4O60885 1362 aaPredicted RBP3.87□□□□□ -1.79
RAPGEF6-202ENST00000308008 SCAF11Q99590 1463 aaKnown RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 NUP188Q5SRE5 1749 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 HSPA1LP34931 641 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 FAM160A1Q05DH4 1040 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 MAP9Q49MG5 647 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 C1QTNF12Q5T7M4 302 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 ICE2Q659A1 982 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 NME8Q8N427 588 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 UBR7Q8N806 425 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 TPCN2Q8NHX9 752 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 SYMPKQ92797 1274 aaKnown RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 FAXDC2Q96IV6 333 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 PCDHB9Q9Y5E1 797 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 KIDINS220Q9ULH0 1771 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 UBR1Q8IWV7 1749 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 ADGRB3O60242 1522 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 EFCAB6Q5THR3 1501 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 SPTLC1O15269 473 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 LILRB3O75022 631 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 POLD1P28340 1107 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 MCCD1P59942 119 aaPredicted RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 C1QTNF8P60827 252 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 NFE2L2Q16236 605 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 PXYLP1Q8TE99 480 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 SLX1AQ9BQ83 275 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 IER2Q9BTL4 223 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 PYCARDQ9ULZ3 195 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 PPP1R3GB7ZBB8 358 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 ICMTO60725 284 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 CDC45O75419 566 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 CHMLP26374 656 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 RXRBP28702 533 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 SATB1Q01826 763 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 TTC12Q9H892 705 aaPredicted RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 FHOD1Q9Y613 1164 aa3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 DNMT3AQ9Y6K1 912 aaPredicted RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 ROCK2O75116 1388 aaKnown RBP3.86□□□□□ -1.79
RAPGEF6-202ENST00000308008 MTUS2Q5JR59 1369 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms