RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 ZNF445P59923 1031 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 CAVIN1Q6NZI2 390 aaKnown RBP19.75■□□□□ 0.75
TVP23B-201ENST00000307767 TICAM2Q86XR7 235 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 NECAB1Q8N987 351 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 RBM27Q9P2N5 1060 aaKnown RBP19.75■□□□□ 0.75
TVP23B-201ENST00000307767 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.75■□□□□ 0.75
TVP23B-201ENST00000307767 SPATA31A5Q5VU36 1347 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 SPATA31A7Q8IWB4 1347 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 IFIT1P09914 478 aaKnown RBP19.75■□□□□ 0.75
TVP23B-201ENST00000307767 SCARF1Q14162 830 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 DDB1Q16531 1140 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 HSP90AB3PQ58FF7 597 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 XAGE2Q96GT9 111 aa19.75■□□□□ 0.75
TVP23B-201ENST00000307767 PHLPP1O60346 1717 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 CTSWP56202 376 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 IFIT5Q13325 482 aaKnown RBP19.74■□□□□ 0.75
TVP23B-201ENST00000307767 ZSCAN23Q3MJ62 389 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 BLOC1S2Q6QNY1 142 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 STOX1Q6ZVD7 989 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 DZIP3Q86Y13 1208 aaKnown RBP19.74■□□□□ 0.75
TVP23B-201ENST00000307767 HELLSQ9NRZ9 838 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 ZSCAN22P10073 491 aaPredicted RBP19.74■□□□□ 0.75
TVP23B-201ENST00000307767 GJB2P29033 226 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 SMC3Q9UQE7 1217 aa19.74■□□□□ 0.75
TVP23B-201ENST00000307767 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
TVP23B-201ENST00000307767 ANKRD36CQ5JPF3 1778 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
TVP23B-201ENST00000307767 STX6O43752 255 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 ITGA6P23229 1130 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 ITPK1Q13572 414 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 VGLL2Q8N8G2 317 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 ACSBG1Q96GR2 724 aa19.73■□□□□ 0.75
TVP23B-201ENST00000307767 MAST3O60307 1309 aa19.72■□□□□ 0.75
TVP23B-201ENST00000307767 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
TVP23B-201ENST00000307767 NUP98P52948 1817 aa19.72■□□□□ 0.75
TVP23B-201ENST00000307767 FOXP2O15409 715 aa19.72■□□□□ 0.75
TVP23B-201ENST00000307767 GDPD2Q9HCC8 539 aa19.72■□□□□ 0.75
TVP23B-201ENST00000307767 RNF113AO15541 343 aaKnown RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 GADD45BO75293 160 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 NCLP19338 710 aaKnown RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 FOXD4L6Q3SYB3 417 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
TVP23B-201ENST00000307767 AKAP2Q9Y2D5 859 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 SPEF2Q9C093 1822 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 M0R2C6 588 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 TMEM87AQ8NBN3 555 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 OSBP2Q969R2 916 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 NEK1Q96PY6 1258 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 DSCC1Q9BVC3 393 aa19.71■□□□□ 0.75
TVP23B-201ENST00000307767 F13A1P00488 732 aa19.7■□□□□ 0.74
TVP23B-201ENST00000307767 CRKLP46109 303 aaKnown RBP19.7■□□□□ 0.74
TVP23B-201ENST00000307767 KAT6BQ8WYB5 2073 aa19.7■□□□□ 0.74
TVP23B-201ENST00000307767 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
TVP23B-201ENST00000307767 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
TVP23B-201ENST00000307767 SIK1P57059 783 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 KRT32Q14532 448 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 PI16Q6UXB8 463 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 LDHAL6AQ6ZMR3 332 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 USP48Q86UV5 1035 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
TVP23B-201ENST00000307767 CCDC87Q9NVE4 849 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 RREB1Q92766 1687 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 PDE8AO60658 829 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 HSPD1P10809 573 aaKnown RBP19.69■□□□□ 0.74
TVP23B-201ENST00000307767 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
TVP23B-201ENST00000307767 RTN4Q9NQC3 1192 aaKnown RBP19.69■□□□□ 0.74
TVP23B-201ENST00000307767 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 ZAP70P43403 619 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 ANKRD1Q15327 319 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 CNPY2Q9Y2B0 182 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 LRP5O75197 1615 aa19.68■□□□□ 0.74
TVP23B-201ENST00000307767 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 KCNQ2O43526 872 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 CAMTA2O94983 1202 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
TVP23B-201ENST00000307767 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 TTC39AQ5SRH9 613 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
TVP23B-201ENST00000307767 METTL24Q5JXM2 366 aa19.67■□□□□ 0.74
TVP23B-201ENST00000307767 MCAMP43121 646 aa19.66■□□□□ 0.74
TVP23B-201ENST00000307767 EXOSC10Q01780 885 aaKnown RBP19.66■□□□□ 0.74
TVP23B-201ENST00000307767 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
TVP23B-201ENST00000307767 MBD3O95983 291 aa19.66■□□□□ 0.74
TVP23B-201ENST00000307767 ABCC12Q96J65 1359 aa19.65■□□□□ 0.74
TVP23B-201ENST00000307767 TTLL5Q6EMB2 1281 aa19.65■□□□□ 0.74
TVP23B-201ENST00000307767 Q6ZUG5 572 aa19.65■□□□□ 0.74
TVP23B-201ENST00000307767 ZNF512BQ96KM6 892 aaPredicted RBP19.65■□□□□ 0.74
TVP23B-201ENST00000307767 NWD2Q9ULI1 1742 aa19.65■□□□□ 0.74
TVP23B-201ENST00000307767 PDE8BO95263 885 aa19.64■□□□□ 0.74
TVP23B-201ENST00000307767 FGFR2P21802 821 aa19.64■□□□□ 0.74
TVP23B-201ENST00000307767 AGXT2Q9BYV1 514 aa19.64■□□□□ 0.74
TVP23B-201ENST00000307767 RBSNQ9H1K0 784 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms