RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 TIAM2Q8IVF5 1701 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 RPS8P62241 208 aaKnown RBP7.49□□□□□ -1.21
ZNF440-201ENST00000304060 AIMP1Q12904 312 aaKnown RBP7.49□□□□□ -1.21
ZNF440-201ENST00000304060 DLGAP5Q15398 846 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 ECE2O60344 883 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 RBM5P52756 815 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZNF440-201ENST00000304060 CST9Q5W186 159 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 ANKRD2Q9GZV1 360 aa7.49□□□□□ -1.21
ZNF440-201ENST00000304060 ANGEL1Q9UNK9 670 aaKnown RBP7.49□□□□□ -1.21
ZNF440-201ENST00000304060 SLC10A5Q5PT55 438 aa7.48□□□□□ -1.21
ZNF440-201ENST00000304060 CWC22Q9HCG8 908 aaKnown RBP7.48□□□□□ -1.21
ZNF440-201ENST00000304060 RIC1Q4ADV7 1423 aa7.48□□□□□ -1.21
ZNF440-201ENST00000304060 DLL1O00548 723 aa7.48□□□□□ -1.21
ZNF440-201ENST00000304060 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
ZNF440-201ENST00000304060 WDR43Q15061 677 aaKnown RBP eCLIP7.48□□□□□ -1.21
ZNF440-201ENST00000304060 RTFDC1Q9BY42 306 aaPredicted RBP7.48□□□□□ -1.21
ZNF440-201ENST00000304060 PSMD14O00487 310 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 SP3Q02447 781 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 IL17REQ8NFR9 667 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 ZNF296Q8WUU4 475 aaPredicted RBP7.47□□□□□ -1.21
ZNF440-201ENST00000304060 MPHOSPH8Q99549 860 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 DBNDD1Q9H9R9 158 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 SCARF1Q14162 830 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 RSBN1LQ6PCB5 846 aaPredicted RBP7.47□□□□□ -1.21
ZNF440-201ENST00000304060 SAMD7Q7Z3H4 446 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 PKNOX2Q96KN3 472 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 CSRNP1Q96S65 589 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 RGPD2P0DJD1 1756 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 FRAT2O75474 233 aaPredicted RBP7.47□□□□□ -1.21
ZNF440-201ENST00000304060 CCAR1Q8IX12 1150 aaKnown RBP7.47□□□□□ -1.21
ZNF440-201ENST00000304060 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 HYPKQ9NX55 129 aa7.47□□□□□ -1.21
ZNF440-201ENST00000304060 TBC1D8O95759 1140 aa7.46□□□□□ -1.21
ZNF440-201ENST00000304060 RASAL3Q86YV0 1011 aa7.46□□□□□ -1.21
ZNF440-201ENST00000304060 ABCC4O15439 1325 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 XDHP47989 1333 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 UBE2Q2LH0YL09 131 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 ZBTB48P10074 688 aaPredicted RBP7.46□□□□□ -1.22
ZNF440-201ENST00000304060 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
ZNF440-201ENST00000304060 MAP2P11137 1827 aaKnown RBP7.46□□□□□ -1.22
ZNF440-201ENST00000304060 ADM5C9JUS6 153 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 DOK7Q18PE1 504 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 SUSD4Q5VX71 490 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 RAET1EQ8TD07 263 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
ZNF440-201ENST00000304060 LAS1LQ9Y4W2 734 aaKnown RBP7.46□□□□□ -1.22
ZNF440-201ENST00000304060 TOGARAM1Q9Y4F4 1720 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 SBF1O95248 1867 aa7.46□□□□□ -1.22
ZNF440-201ENST00000304060 DCAF15Q66K64 600 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 TRPM4Q8TD43 1214 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 TRIM47Q96LD4 638 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 MRC1P22897 1456 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 PIP4K2AP48426 406 aaPredicted RBP7.45□□□□□ -1.22
ZNF440-201ENST00000304060 HCLS1P14317 486 aaPredicted RBP7.45□□□□□ -1.22
ZNF440-201ENST00000304060 MCM10Q7L590 875 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 ANKRD13AQ8IZ07 590 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 IRS4O14654 1257 aaPredicted RBP7.45□□□□□ -1.22
ZNF440-201ENST00000304060 HDGFL1Q5TGJ6 251 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 IFNLR1Q8IU57 520 aaPredicted RBP7.45□□□□□ -1.22
ZNF440-201ENST00000304060 ZNF34Q8IZ26 560 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 COA1Q9GZY4 146 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 MYOZ2Q9NPC6 264 aa7.45□□□□□ -1.22
ZNF440-201ENST00000304060 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
ZNF440-201ENST00000304060 TM4SF4P48230 202 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 COPS6Q7L5N1 327 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 ZNF804AQ7Z570 1209 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 VPS37DQ86XT2 251 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 VEZTQ9HBM0 779 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 GTF2A2P52657 109 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 NFE2L2Q16236 605 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 MYH16Q9H6N6 1097 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 MKRN3Q13064 507 aaKnown RBP7.44□□□□□ -1.22
ZNF440-201ENST00000304060 PRKG1Q13976 671 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 HLFQ16534 295 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 PRKAG2Q9UGJ0 569 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
ZNF440-201ENST00000304060 ZBTB12Q9Y330 459 aaPredicted RBP7.44□□□□□ -1.22
ZNF440-201ENST00000304060 A0A1W2PPC1 479 aa7.43□□□□□ -1.22
ZNF440-201ENST00000304060 FMNL1O95466 1100 aaPredicted RBP7.43□□□□□ -1.22
ZNF440-201ENST00000304060 PLBD2Q8NHP8 589 aa7.43□□□□□ -1.22
ZNF440-201ENST00000304060 EP400Q96L91 3159 aa7.43□□□□□ -1.22
ZNF440-201ENST00000304060 NTSR2O95665 410 aa7.43□□□□□ -1.22
ZNF440-201ENST00000304060 DICER1Q9UPY3 1922 aaKnown RBP7.43□□□□□ -1.22
ZNF440-201ENST00000304060 XAGE3Q8WTP9 111 aa7.43□□□□□ -1.22
ZNF440-201ENST00000304060 SALL2Q9Y467 1007 aaPredicted RBP7.43□□□□□ -1.22
ZNF440-201ENST00000304060 COL5A3P25940 1745 aaPredicted RBP7.43□□□□□ -1.22
ZNF440-201ENST00000304060 PDE8AO60658 829 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 VIL1P09327 827 aaKnown RBP7.42□□□□□ -1.22
ZNF440-201ENST00000304060 HOXB7P09629 217 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 CETPP11597 493 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 CWC25Q9NXE8 425 aaPredicted RBP7.42□□□□□ -1.22
ZNF440-201ENST00000304060 EVI5O60447 810 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 SF3B3Q15393 1217 aaKnown RBP7.42□□□□□ -1.22
ZNF440-201ENST00000304060 SPRYD7Q5W111 196 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 TTLL7Q6ZT98 887 aa7.42□□□□□ -1.22
ZNF440-201ENST00000304060 NLRP10Q86W26 655 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms