RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TNNT1P13805 278 aa15.98■□□□□ 0.15
CTTN-201ENST00000301843 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
CTTN-201ENST00000301843 SCAND2PQ9GZW5 306 aaPredicted RBP15.98■□□□□ 0.15
CTTN-201ENST00000301843 CLSTN2Q9H4D0 955 aa15.98■□□□□ 0.15
CTTN-201ENST00000301843 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 TIMM10P62072 90 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 GCKRQ14397 625 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 GOLPH3LQ9H4A5 285 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
CTTN-201ENST00000301843 GJB4Q9NTQ9 266 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 OVOS2A0A0G2JMS6 1433 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 GOLIM4O00461 696 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
CTTN-201ENST00000301843 ZNF496Q96IT1 587 aaPredicted RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
CTTN-201ENST00000301843 RESTQ13127 1097 aa15.96■□□□□ 0.15
CTTN-201ENST00000301843 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
CTTN-201ENST00000301843 ZSCAN20P17040 1043 aaPredicted RBP15.96■□□□□ 0.15
CTTN-201ENST00000301843 TNNI3KQ59H18 835 aa15.96■□□□□ 0.15
CTTN-201ENST00000301843 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
CTTN-201ENST00000301843 FPGT-TNNI3KV9GXZ4 949 aa15.96■□□□□ 0.15
CTTN-201ENST00000301843 GTF2F1P35269 517 aaKnown RBP eCLIP15.95■□□□□ 0.141e-7■■■■■ 37.5
CTTN-201ENST00000301843 TTLL5Q6EMB2 1281 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
CTTN-201ENST00000301843 ZNF609O15014 1411 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 USP28Q96RU2 1077 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 HIP1O00291 1037 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 HAND2P61296 217 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 PTPN12Q05209 780 aaKnown RBP15.95■□□□□ 0.14
CTTN-201ENST00000301843 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
CTTN-201ENST00000301843 PTPN21Q16825 1174 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 ZNF594Q96JF6 807 aaPredicted RBP15.94■□□□□ 0.14
CTTN-201ENST00000301843 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 A0A087WZG4 1122 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
CTTN-201ENST00000301843 CABLES1Q8TDN4 633 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
CTTN-201ENST00000301843 ELP1O95163 1332 aa15.94■□□□□ 0.14
CTTN-201ENST00000301843 BIN1O00499 593 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 SMAP1Q8IYB5 467 aaPredicted RBP15.93■□□□□ 0.14
CTTN-201ENST00000301843 ME1P48163 572 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 PLA2G4DQ86XP0 818 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 TRPM3Q9HCF6 1732 aaPredicted RBP15.93■□□□□ 0.14
CTTN-201ENST00000301843 PTPDC1A2A3K4 754 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 CTDNEP1O95476 244 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 LMBR1LQ6UX01 489 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 ANKRD13DQ6ZTN6 518 aa15.93■□□□□ 0.14
CTTN-201ENST00000301843 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
CTTN-201ENST00000301843 CRYBG1Q9Y4K1 1723 aa15.92■□□□□ 0.14
CTTN-201ENST00000301843 SIPA1L3O60292 1781 aaPredicted RBP15.92■□□□□ 0.14
CTTN-201ENST00000301843 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
CTTN-201ENST00000301843 A0A1B0GVL5 298 aa15.92■□□□□ 0.14
CTTN-201ENST00000301843 BECN2A8MW95 431 aa15.92■□□□□ 0.14
CTTN-201ENST00000301843 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
CTTN-201ENST00000301843 ADAMTSL3P82987 1691 aa15.91■□□□□ 0.14
CTTN-201ENST00000301843 AOPEPQ8N6M6 819 aa15.91■□□□□ 0.14
CTTN-201ENST00000301843 NSUN7Q8NE18 718 aaKnown RBP15.91■□□□□ 0.14
CTTN-201ENST00000301843 TDRD7Q8NHU6 1098 aaKnown RBP15.91■□□□□ 0.14
CTTN-201ENST00000301843 MCMDC2Q4G0Z9 681 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 FSIP1Q8NA03 581 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 ADAMTS7Q9UKP4 1686 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 ADD1P35611 737 aaKnown RBP15.9■□□□□ 0.14
CTTN-201ENST00000301843 METTL22Q9BUU2 404 aaPredicted RBP15.9■□□□□ 0.14
CTTN-201ENST00000301843 LMTK3Q96Q04 1460 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 IQCB1Q15051 598 aa15.9■□□□□ 0.14
CTTN-201ENST00000301843 ATP5JP18859 108 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
CTTN-201ENST00000301843 RAPGEF4Q8WZA2 1011 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 HMG20BQ9P0W2 317 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 SKILP12757 684 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 LRRC24Q50LG9 513 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 CCDC112Q8NEF3 446 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 RGPD5Q99666 1765 aa15.89■□□□□ 0.13
CTTN-201ENST00000301843 TPM3P06753 285 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTTN-201ENST00000301843 CCDC73Q6ZRK6 1079 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 KINO60870 393 aaKnown RBP15.88■□□□□ 0.13
CTTN-201ENST00000301843 DMTNQ08495 405 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 CEP135Q66GS9 1140 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 STK11IPQ8N1F8 1099 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 ANKRD7Q92527 254 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
CTTN-201ENST00000301843 ERBB3P21860 1342 aa15.87■□□□□ 0.13
CTTN-201ENST00000301843 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms