RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 CEP170BQ9Y4F5 1589 aaPredicted RBP20.34■□□□□ 0.85
CHRNA5-201ENST00000299565 PREX1Q8TCU6 1659 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 CDK11BP21127 795 aaKnown RBP20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 CCDC158Q5M9N0 1113 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 NAT10Q9H0A0 1025 aaKnown RBP20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 HMG20BQ9P0W2 317 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 AXIN2Q9Y2T1 843 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 AP5Z1O43299 807 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 TAF5LO75529 589 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 CYP21A2P08686 494 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 EVA1CP58658 441 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 TM6SF1Q9BZW5 370 aa20.33■□□□□ 0.85
CHRNA5-201ENST00000299565 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.84
CHRNA5-201ENST00000299565 ADCY9O60503 1353 aa20.33■□□□□ 0.84
CHRNA5-201ENST00000299565 SERPINC1P01008 464 aa20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 IGKV5-2P06315 115 aa20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 GPHNQ9NQX3 736 aaPredicted RBP20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 ORC3Q9UBD5 711 aaPredicted RBP20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 LMOD1P29536 600 aaPredicted RBP20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 PTPN21Q16825 1174 aa20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 TMC6Q7Z403 805 aa20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 CCDC94Q9BW85 323 aaPredicted RBP20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 PAG1Q9NWQ8 432 aa20.32■□□□□ 0.84
CHRNA5-201ENST00000299565 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 A1BGP04217 495 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 TERF1P54274 439 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 USP28Q96RU2 1077 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 GJB4Q9NTQ9 266 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 TRIM29Q14134 588 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 KIAA1524Q8TCG1 905 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 CNNM1Q9NRU3 951 aa20.31■□□□□ 0.84
CHRNA5-201ENST00000299565 ZNF75DP51815 510 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 CEP135Q66GS9 1140 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 MICU3Q86XE3 530 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 IFNL2Q8IZJ0 200 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 ANO10Q9NW15 660 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 CPLX2Q6PUV4 134 aaKnown RBP20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 BABAM1Q9NWV8 329 aa20.3■□□□□ 0.84
CHRNA5-201ENST00000299565 HOXB7P09629 217 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 SCRN1Q12765 414 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 TOB2Q14106 344 aaPredicted RBP20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 CLSTN2Q9H4D0 955 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 KIF20BQ96Q89 1820 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 STX1AQ16623 288 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 DHX32Q7L7V1 743 aaKnown RBP20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 METTL22Q9BUU2 404 aaPredicted RBP20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 PRDM11Q9NQV5 511 aa20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
CHRNA5-201ENST00000299565 ERICH4A6NGS2 130 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 CCDC69A6NI79 296 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 IMMTQ16891 758 aaKnown RBP20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 CFAP100Q494V2 611 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 GTF3C6Q969F1 213 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 CACTINQ8WUQ7 758 aaKnown RBP20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 KCNF1Q9H3M0 494 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 USP31Q70CQ4 1352 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 PGBD1Q96JS3 809 aa20.28■□□□□ 0.84
CHRNA5-201ENST00000299565 PES1O00541 588 aaKnown RBP20.27■□□□□ 0.84
CHRNA5-201ENST00000299565 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
CHRNA5-201ENST00000299565 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
CHRNA5-201ENST00000299565 KDRP35968 1356 aa20.27■□□□□ 0.84
CHRNA5-201ENST00000299565 C11orf57Q6ZUT1 292 aaPredicted RBP20.27■□□□□ 0.84
CHRNA5-201ENST00000299565 LRRC24Q50LG9 513 aa20.27■□□□□ 0.83
CHRNA5-201ENST00000299565 A0A0G2JLW4 131 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 METTL24Q5JXM2 366 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 TTLL7Q6ZT98 887 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 SLC3A2P08195 630 aaKnown RBP20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 TMEM87AQ8NBN3 555 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 ST3GAL1Q11201 340 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 MNS1Q8NEH6 495 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
CHRNA5-201ENST00000299565 KNDC1Q76NI1 1749 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 A0A1B0GUL7 405 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 TCHHQ07283 1943 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 IFNKQ9P0W0 207 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 ZNF213O14771 459 aa20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 DHX16O60231 1041 aaKnown RBP20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 PUS3Q9BZE2 481 aaKnown RBP20.25■□□□□ 0.83
CHRNA5-201ENST00000299565 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 DLC1Q96QB1 1528 aa20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 KAZALD1Q96I82 304 aa20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
CHRNA5-201ENST00000299565 PTPN12Q05209 780 aaKnown RBP20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 SPECC1Q5M775 1068 aa20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 ATP5JP18859 108 aa20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 MRPS27Q92552 414 aaKnown RBP20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 PTPRUQ92729 1446 aa20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 EPB41L2O43491 1005 aaKnown RBP20.23■□□□□ 0.83
CHRNA5-201ENST00000299565 PRC1O43663 620 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms