RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 MAP9Q49MG5 647 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 GTF3C6Q969F1 213 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC25Q86WR0 208 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 PPANQ9NQ55 473 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 CAPZA3Q96KX2 299 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 IQCGQ9H095 443 aaKnown RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 ERCC5P28715 1186 aaPredicted RBP11.34□□□□□ -0.59
TRIM44-201ENST00000299413 GRPEL1Q9HAV7 217 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
TRIM44-201ENST00000299413 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 MARCKSP29966 332 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 FCHSD1Q86WN1 690 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 TCEANC2Q96MN5 208 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 STK25O00506 426 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 UAP1Q16222 522 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 MYCLP12524 364 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 AMPD3Q01432 767 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 TTC30AQ86WT1 665 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 CCDC114Q96M63 670 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 C16orf45Q96MC5 204 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 DCAF17Q5H9S7 520 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 SLU7O95391 586 aaKnown RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 RTN1Q16799 776 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 IVNS1ABPQ9Y6Y0 642 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 STK32BQ9NY57 414 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-201ENST00000299413 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 SMC1BQ8NDV3 1235 aa11.33□□□□□ -0.6
TRIM44-201ENST00000299413 TTC36A6NLP5 189 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
TRIM44-201ENST00000299413 CHPF2Q9P2E5 772 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 SPDYE3A6NKU9 549 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 SLC52A1Q9NWF4 448 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 C6orf50Q9HD87 102 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 RXRAP19793 462 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 TCP10Q12799 353 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 SPATA24Q86W54 205 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 KIFC2Q96AC6 838 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 UFL1O94874 794 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
TRIM44-201ENST00000299413 FAM114A1Q8IWE2 563 aa11.32□□□□□ -0.6
TRIM44-201ENST00000299413 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 CDK13Q14004 1512 aaKnown RBP11.31□□□□□ -0.6
TRIM44-201ENST00000299413 GJB2P29033 226 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 IFRD2Q12894 506 aaPredicted RBP11.31□□□□□ -0.6
TRIM44-201ENST00000299413 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 CUL4BQ13620 913 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 B4DLN1 442 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
TRIM44-201ENST00000299413 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 XAGE3Q8WTP9 111 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 BMS1Q14692 1282 aaKnown RBP11.31□□□□□ -0.6
TRIM44-201ENST00000299413 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 C4orf50Q6ZRC1 276 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 CCT6BQ92526 530 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
TRIM44-201ENST00000299413 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 ARHGEF11O15085 1522 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 BIRC3Q13489 604 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 USH1GQ495M9 461 aa11.31□□□□□ -0.6
TRIM44-201ENST00000299413 ANO10Q9NW15 660 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
TRIM44-201ENST00000299413 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 PPP4R4Q6NUP7 873 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 DBF4Q9UBU7 674 aaPredicted RBP11.3□□□□□ -0.6
TRIM44-201ENST00000299413 MCM7P33993 719 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
TRIM44-201ENST00000299413 N4BP3O15049 544 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 CEP112Q8N8E3 955 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 NCOA7Q8NI08 942 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 SELENOSQ9BQE4 189 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
TRIM44-201ENST00000299413 GRIN2BQ13224 1484 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 KLF18A0A0U1RQI7 1052 aa11.3□□□□□ -0.6
TRIM44-201ENST00000299413 ZBTB16Q05516 673 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 IPO4Q8TEX9 1081 aaKnown RBP11.29□□□□□ -0.6
TRIM44-201ENST00000299413 CCDC169A6NNP5 214 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 AKR1B10O60218 316 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 SPAG5Q96R06 1193 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 ZKSCAN3Q9BRR0 538 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 RRP36Q96EU6 259 aaKnown RBP11.29□□□□□ -0.6
TRIM44-201ENST00000299413 KIAA0753Q2KHM9 967 aa11.29□□□□□ -0.6
TRIM44-201ENST00000299413 FLIIQ13045 1269 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms