RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MRPL50Q8N5N7 158 aaKnown RBP7.59□□□□□ -1.19
SSX3-201ENST00000298396 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 NLRP7Q8WX94 980 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 BCL2L13Q9BXK5 485 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 RTCBQ9Y3I0 505 aaKnown RBP7.59□□□□□ -1.19
SSX3-201ENST00000298396 SRCAPQ6ZRS2 3230 aa7.59□□□□□ -1.19
SSX3-201ENST00000298396 SPEF2Q9C093 1822 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 MS4A1P11836 297 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 GYS1P13807 737 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 MMRN1Q13201 1228 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 TTLL12Q14166 644 aaPredicted RBP7.58□□□□□ -1.2
SSX3-201ENST00000298396 HLFQ16534 295 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 CCDC30Q5VVM6 783 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 USPL1Q5W0Q7 1092 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 ZFRQ96KR1 1074 aaKnown RBP7.58□□□□□ -1.2
SSX3-201ENST00000298396 DBF4Q9UBU7 674 aaPredicted RBP7.58□□□□□ -1.2
SSX3-201ENST00000298396 NARFQ9UHQ1 456 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 TBC1D2BQ9UPU7 963 aa7.58□□□□□ -1.2
SSX3-201ENST00000298396 ZNF330Q9Y3S2 320 aaPredicted RBP7.58□□□□□ -1.2
SSX3-201ENST00000298396 MAP3K15Q6ZN16 1313 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 BCAR3O75815 825 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 CT47B1P0C2W7 299 aaPredicted RBP7.57□□□□□ -1.2
SSX3-201ENST00000298396 TRAPPC3LQ5T215 181 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 SWT1Q5T5J6 900 aaKnown RBP7.57□□□□□ -1.2
SSX3-201ENST00000298396 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 COPS6Q7L5N1 327 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 DZIP3Q86Y13 1208 aaKnown RBP7.57□□□□□ -1.2
SSX3-201ENST00000298396 HYPKQ9NX55 129 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 TNNQ9UQP3 1299 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 ATP10DQ9P241 1426 aa7.57□□□□□ -1.2
SSX3-201ENST00000298396 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 CD46P15529 392 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 DDR1Q08345 913 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 AIMP1Q12904 312 aaKnown RBP7.56□□□□□ -1.2
SSX3-201ENST00000298396 FLIIQ13045 1269 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 ALDH1L2Q3SY69 923 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 FLAD1Q8NFF5 587 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 COL4A1P02462 1669 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 A0A1B0GUL6 1792 aa7.56□□□□□ -1.2
SSX3-201ENST00000298396 UBN2Q6ZU65 1347 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 A0A087WZG4 1122 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 ERVV-1B6SEH8 477 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 F6X3S4 739 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 TM4SF1P30408 202 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 SSTR3P32745 418 aaPredicted RBP7.55□□□□□ -1.2
SSX3-201ENST00000298396 RFC4P35249 363 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 NFIXQ14938 502 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 TBC1D9BQ66K14 1250 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 SAMD7Q7Z3H4 446 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 SPNS2Q8IVW8 549 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 STK31Q9BXU1 1019 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 CARMIL3Q8ND23 1372 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
SSX3-201ENST00000298396 PI4KAP2A4QPH2 592 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 POLRMTO00411 1230 aaKnown RBP7.54□□□□□ -1.2
SSX3-201ENST00000298396 ZPR1O75312 459 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 IGKV5-2P06315 115 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 HMGB2P26583 209 aaKnown RBP7.54□□□□□ -1.2
SSX3-201ENST00000298396 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 ZNF34Q8IZ26 560 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 PI4KAP1Q8N8J0 262 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 PLBD2Q8NHP8 589 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 MTFR1LQ9H019 292 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 NOB1Q9ULX3 412 aaKnown RBP7.54□□□□□ -1.2
SSX3-201ENST00000298396 ARFGEF1Q9Y6D6 1849 aa7.54□□□□□ -1.2
SSX3-201ENST00000298396 SLX4Q8IY92 1834 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 SOWAHBA6NEL2 793 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 SLC10A3P09131 477 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 RLBP1P12271 317 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 GPTP24298 496 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 CLEC4GQ6UXB4 293 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 KIF6Q6ZMV9 814 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 FAM117AQ9C073 453 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 ABCC12Q96J65 1359 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
SSX3-201ENST00000298396 ABCC4O15439 1325 aa7.52□□□□□ -1.2
SSX3-201ENST00000298396 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.2
SSX3-201ENST00000298396 GOLGB1Q14789 3259 aaKnown RBP7.52□□□□□ -1.21
SSX3-201ENST00000298396 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 NTSR2O95665 410 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 MMP10P09238 476 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 TRIM27P14373 513 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
SSX3-201ENST00000298396 TCIRG1Q13488 830 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 CWF19L2Q2TBE0 894 aaKnown RBP7.52□□□□□ -1.21
SSX3-201ENST00000298396 BEND3Q5T5X7 828 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 BICDL1Q6ZP65 573 aa7.52□□□□□ -1.21
SSX3-201ENST00000298396 NLRP10Q86W26 655 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms