RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 KANK3Q6NY19 840 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 KRT222Q8N1A0 295 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 SHTN1A0MZ66 631 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 MYO1BO43795 1136 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 NPATQ14207 1427 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 HLA-DOAP06340 250 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 PTGS1P23219 599 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 NEFHP12036 1026 aa18.44■□□□□ 0.54
ARHGEF28-201ENST00000296794 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 DNAI1Q9UI46 699 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 NIP7Q9Y221 180 aaKnown RBP eCLIP18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 GOLGA6L7A0A1B0GV03 622 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 TSG101Q99816 390 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 ALG1Q9BT22 464 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 KAT6BQ8WYB5 2073 aa18.43■□□□□ 0.54
ARHGEF28-201ENST00000296794 ADGRL2O95490 1459 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 CUL5Q93034 780 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 PAFAH1B1P43034 410 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 ABCC1P33527 1531 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 DNA2P51530 1060 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 HSP90AA4PQ58FG1 418 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 TFCP2L1Q9NZI6 479 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 LINS1Q8NG48 757 aa18.42■□□□□ 0.54
ARHGEF28-201ENST00000296794 CPA1P15085 419 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 PDE4BQ07343 736 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 MTIF2P46199 727 aaKnown RBP18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 G2E3Q7L622 706 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 ZBTB43O43298 467 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 ENOX2Q16206 610 aaKnown RBP18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 SIRT1Q96EB6 747 aa18.41■□□□□ 0.54
ARHGEF28-201ENST00000296794 TDRD12Q587J7 1177 aaKnown RBP18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 RAB34Q9BZG1 259 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 V9GYY5 206 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 FGFR1OPO95684 399 aaKnown RBP18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 LUZP1Q86V48 1076 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 N4BP3O15049 544 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 POLD1P28340 1107 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 NYXQ9GZU5 481 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 RTL1A6NKG5 1358 aa18.4■□□□□ 0.54
ARHGEF28-201ENST00000296794 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.542e-6■■■■□ 20.2
ARHGEF28-201ENST00000296794 GSTO1P78417 241 aa18.39■□□□□ 0.54
ARHGEF28-201ENST00000296794 SEPT7Q16181 437 aaKnown RBP18.39■□□□□ 0.54
ARHGEF28-201ENST00000296794 BTG4Q9NY30 223 aa18.39■□□□□ 0.54
ARHGEF28-201ENST00000296794 TRPM2O94759 1503 aa18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 TSPY2A6NKD2 308 aa18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 CDCA7Q9BWT1 371 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 SLU7O95391 586 aaKnown RBP18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 LMAN1P49257 510 aa18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 SPTLC2O15270 562 aa18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 LMOD1P29536 600 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF28-201ENST00000296794 PPP1R12BO60237 982 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 EYA1Q99502 592 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 ZNF445P59923 1031 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 ATP2B3Q16720 1220 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 UTP14AQ9BVJ6 771 aaKnown RBP18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 CRNKL1Q9BZJ0 848 aaKnown RBP18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 IL15P40933 162 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 UBA7P41226 1012 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 IP6K1Q92551 441 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 PYM1Q9BRP8 204 aaKnown RBP18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
ARHGEF28-201ENST00000296794 KIF5BP33176 963 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 APOBRQ0VD83 1088 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 WTAPQ15007 396 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 EHMT1Q9H9B1 1298 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 CCDC94Q9BW85 323 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 PRC1O43663 620 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 SCLT1Q96NL6 688 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 RAD50Q92878 1312 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 AFMP43652 599 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 PPP4R3AQ6IN85 833 aa18.37■□□□□ 0.53
ARHGEF28-201ENST00000296794 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 VPS36Q86VN1 386 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
ARHGEF28-201ENST00000296794 ALS2CR12Q96Q35 445 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms