RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 CCDC151A5D8V7 595 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 MYBL2P10244 700 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 RFC1P35251 1148 aaPredicted RBP13.34□□□□□ -0.27
SNIP1-201ENST00000296215 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 GRAMD4Q6IC98 578 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
SNIP1-201ENST00000296215 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
SNIP1-201ENST00000296215 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
SNIP1-201ENST00000296215 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.27
SNIP1-201ENST00000296215 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 ARMC3Q5W041 872 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 OLFML1Q6UWY5 402 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 RNF10Q8N5U6 811 aaKnown RBP13.33□□□□□ -0.28
SNIP1-201ENST00000296215 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 RGL1Q9NZL6 768 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 hCG_2014768A0A024R1R8 64 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 HAUS1Q96CS2 278 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 E7EVH7 732 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
SNIP1-201ENST00000296215 CKAP4Q07065 602 aaKnown RBP13.33□□□□□ -0.28
SNIP1-201ENST00000296215 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
SNIP1-201ENST00000296215 HELLSQ9NRZ9 838 aa13.33□□□□□ -0.28
SNIP1-201ENST00000296215 PECAM1P16284 738 aaPredicted RBP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 TAF11Q15544 211 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 RAD21O60216 631 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 GJA8P48165 433 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 NOP53Q9NZM5 478 aaKnown RBP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 RASSF10A6NK89 507 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 STK38Q15208 465 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 ACTR5Q9H9F9 607 aaPredicted RBP13.32□□□□□ -0.28
SNIP1-201ENST00000296215 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
SNIP1-201ENST00000296215 CC2D1AQ6P1N0 951 aaPredicted RBP13.31□□□□□ -0.28
SNIP1-201ENST00000296215 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 KIRREL3Q8IZU9 778 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
SNIP1-201ENST00000296215 ZNF711Q9Y462 761 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 PLEKHG2Q9H7P9 1386 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
SNIP1-201ENST00000296215 ECEL1O95672 775 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 HLTFQ14527 1009 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNIP1-201ENST00000296215 EVC2Q86UK5 1308 aa13.31□□□□□ -0.28
SNIP1-201ENST00000296215 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 PARP9Q8IXQ6 854 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 COG7P83436 770 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 MUM1Q2TAK8 710 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 C16orf87Q6PH81 154 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.286e-6■□□□□ 11
SNIP1-201ENST00000296215 STIM2Q9P246 746 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 FAF1Q9UNN5 650 aaPredicted RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 CCT2P78371 535 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 AOPEPQ8N6M6 819 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 MECOMQ03112 1051 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 CCDC174Q6PII3 467 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 TMEM57Q8N5G2 664 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 CCDC63Q8NA47 563 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 JAKMIP1Q96N16 626 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 FAM167BQ9BTA0 163 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 PAPOLBQ9NRJ5 636 aaKnown RBP13.3□□□□□ -0.28
SNIP1-201ENST00000296215 SCOCQ9UIL1 159 aa13.3□□□□□ -0.28
SNIP1-201ENST00000296215 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 UBASH3AP57075 661 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 HIBCHQ6NVY1 386 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 MTRQ99707 1265 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 ZNF569Q5MCW4 686 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 RHBDL2Q9NX52 303 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 TROVE2P10155 538 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 VCAM1P19320 739 aa13.29□□□□□ -0.28
SNIP1-201ENST00000296215 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
SNIP1-201ENST00000296215 CCDC152Q4G0S7 254 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms