RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 POTEJP0CG39 1038 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 IDEP14735 1019 aa19.84■□□□□ 0.77
CDCP1-201ENST00000296129 RBM25P49756 843 aaKnown RBP19.84■□□□□ 0.77
CDCP1-201ENST00000296129 UBA7P41226 1012 aa19.83■□□□□ 0.77
CDCP1-201ENST00000296129 SMC5Q8IY18 1101 aa19.83■□□□□ 0.77
CDCP1-201ENST00000296129 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.77
CDCP1-201ENST00000296129 PRC1O43663 620 aa19.83■□□□□ 0.77
CDCP1-201ENST00000296129 KANK3Q6NY19 840 aa19.83■□□□□ 0.77
CDCP1-201ENST00000296129 ZBTB7BO15156 539 aaPredicted RBP19.83■□□□□ 0.76
CDCP1-201ENST00000296129 KIF4BQ2VIQ3 1234 aa19.83■□□□□ 0.76
CDCP1-201ENST00000296129 HELBQ8NG08 1087 aaPredicted RBP19.83■□□□□ 0.76
CDCP1-201ENST00000296129 MAGEB6P1A0A0J9YX57 407 aa19.83■□□□□ 0.76
CDCP1-201ENST00000296129 LRSAM1Q6UWE0 723 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 SYKP43405 635 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 TMTC2Q8N394 836 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 PYM1Q9BRP8 204 aaKnown RBP19.82■□□□□ 0.76
CDCP1-201ENST00000296129 F13A1P00488 732 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 HCLS1P14317 486 aaPredicted RBP19.82■□□□□ 0.76
CDCP1-201ENST00000296129 GSDMDP57764 484 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 WDR78Q5VTH9 848 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 CREB3L3Q68CJ9 461 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 DESP17661 470 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 AK2P54819 239 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 TDRD12Q587J7 1177 aaKnown RBP19.82■□□□□ 0.76
CDCP1-201ENST00000296129 NYXQ9GZU5 481 aa19.82■□□□□ 0.76
CDCP1-201ENST00000296129 TNNT1P13805 278 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 CHST3Q7LGC8 479 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 KRI1Q8N9T8 703 aaKnown RBP19.81■□□□□ 0.76
CDCP1-201ENST00000296129 C16orf45Q96MC5 204 aaPredicted RBP19.81■□□□□ 0.76
CDCP1-201ENST00000296129 NPC1L1Q9UHC9 1359 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 NEMFO60524 1076 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 UVSSAQ2YD98 709 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 VPS36Q86VN1 386 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 TAX1BP1Q86VP1 789 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 PICALMQ13492 652 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDCP1-201ENST00000296129 CHMLP26374 656 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 TRMT1LQ7Z2T5 733 aaKnown RBP19.81■□□□□ 0.76
CDCP1-201ENST00000296129 ZNF804AQ7Z570 1209 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 MAGEB6Q8N7X4 407 aa19.81■□□□□ 0.76
CDCP1-201ENST00000296129 LIG1P18858 919 aa19.8■□□□□ 0.76
CDCP1-201ENST00000296129 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
CDCP1-201ENST00000296129 DNM1Q05193 864 aaKnown RBP19.8■□□□□ 0.76
CDCP1-201ENST00000296129 HEATR3Q7Z4Q2 680 aa19.8■□□□□ 0.76
CDCP1-201ENST00000296129 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
CDCP1-201ENST00000296129 DNA2P51530 1060 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 KCNG4Q8TDN1 519 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
CDCP1-201ENST00000296129 CCDC178Q5BJE1 867 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 TMCO3Q6UWJ1 677 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 MIGA1Q8NAN2 632 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 APOBRQ0VD83 1088 aa19.79■□□□□ 0.76
CDCP1-201ENST00000296129 ANKRD62A6NC57 917 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 SEC24BO95487 1268 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 AFMP43652 599 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 CCDC191Q8NCU4 936 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 BTG4Q9NY30 223 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 USO1O60763 962 aaKnown RBP19.78■□□□□ 0.76
CDCP1-201ENST00000296129 ANO6Q4KMQ2 910 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 MARCKSP29966 332 aaPredicted RBP19.78■□□□□ 0.76
CDCP1-201ENST00000296129 FAM114A1Q8IWE2 563 aa19.78■□□□□ 0.76
CDCP1-201ENST00000296129 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 TCERG1LQ5VWI1 586 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 RUFY3Q7L099 469 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 MRPS27Q92552 414 aaKnown RBP19.77■□□□□ 0.76
CDCP1-201ENST00000296129 CCDC171Q6TFL3 1326 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 MYO1BO43795 1136 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
CDCP1-201ENST00000296129 ORAI2Q96SN7 254 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 EXOC1Q9NV70 894 aa19.77■□□□□ 0.76
CDCP1-201ENST00000296129 GNAT2P19087 354 aa19.77■□□□□ 0.75
CDCP1-201ENST00000296129 RTCBQ9Y3I0 505 aaKnown RBP19.77■□□□□ 0.75
CDCP1-201ENST00000296129 USP26Q9BXU7 913 aa19.77■□□□□ 0.75
CDCP1-201ENST00000296129 GBP3Q9H0R5 595 aa19.77■□□□□ 0.75
CDCP1-201ENST00000296129 TAF3Q5VWG9 929 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 TPTE2Q6XPS3 522 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 SAMM50Q9Y512 469 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 CAVIN2O95810 425 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 KIAA0754O94854 1291 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
CDCP1-201ENST00000296129 RRAGBQ5VZM2 374 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 STAT6P42226 847 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 RAD50Q92878 1312 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 TRIM47Q96LD4 638 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 RMND1Q9NWS8 449 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 DACT1Q9NYF0 836 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 TRIM21P19474 475 aaKnown RBP19.75■□□□□ 0.75
CDCP1-201ENST00000296129 OTUD7AQ8TE49 926 aaPredicted RBP19.75■□□□□ 0.75
CDCP1-201ENST00000296129 BMP15O95972 392 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 PLBD2Q8NHP8 589 aa19.75■□□□□ 0.75
CDCP1-201ENST00000296129 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 CETN2P41208 172 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 LRRC27Q9C0I9 530 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 PLXNC1O60486 1568 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms