RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 GIGYF2Q6Y7W6 1299 aaKnown RBP23.8■■□□□ 1.4
CXCL16-201ENST00000293778 TCHHQ07283 1943 aa23.79■■□□□ 1.4
CXCL16-201ENST00000293778 VPS37CA5D8V6 355 aaPredicted RBP23.79■■□□□ 1.4
CXCL16-201ENST00000293778 CYP21A2P08686 494 aa23.79■■□□□ 1.4
CXCL16-201ENST00000293778 PDIA4P13667 645 aaKnown RBP23.79■■□□□ 1.4
CXCL16-201ENST00000293778 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
CXCL16-201ENST00000293778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
CXCL16-201ENST00000293778 AKAP2Q9Y2D5 859 aa23.78■■□□□ 1.4
CXCL16-201ENST00000293778 CSF1RP07333 972 aa23.78■■□□□ 1.4
CXCL16-201ENST00000293778 TAF7LQ5H9L4 462 aa23.78■■□□□ 1.4
CXCL16-201ENST00000293778 LARP1BQ659C4 914 aaKnown RBP23.78■■□□□ 1.4
CXCL16-201ENST00000293778 CCDC85AQ96PX6 553 aaPredicted RBP23.78■■□□□ 1.4
CXCL16-201ENST00000293778 SPEF2Q9C093 1822 aa23.77■■□□□ 1.4
CXCL16-201ENST00000293778 LRP6O75581 1613 aa23.77■■□□□ 1.4
CXCL16-201ENST00000293778 CYP19A1P11511 503 aaPredicted RBP23.77■■□□□ 1.4
CXCL16-201ENST00000293778 EXOC5O00471 708 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 PHF14O94880 888 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 PDCP20941 246 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
CXCL16-201ENST00000293778 HLFQ16534 295 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 SLFNL1Q499Z3 407 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 SLC4A9Q96Q91 983 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 PLCH1Q4KWH8 1693 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 FIBPO43427 364 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 UBE2HP62256 183 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 HSP90AB3PQ58FF7 597 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 CCDC158Q5M9N0 1113 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 GORABQ5T7V8 394 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 DSCC1Q9BVC3 393 aa23.76■■□□□ 1.39
CXCL16-201ENST00000293778 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
CXCL16-201ENST00000293778 CDHR2Q9BYE9 1310 aa23.75■■□□□ 1.39
CXCL16-201ENST00000293778 RNF113AO15541 343 aaKnown RBP23.75■■□□□ 1.39
CXCL16-201ENST00000293778 GPTP24298 496 aa23.75■■□□□ 1.39
CXCL16-201ENST00000293778 CSPP1Q1MSJ5 1256 aa23.75■■□□□ 1.39
CXCL16-201ENST00000293778 NLRP10Q86W26 655 aa23.75■■□□□ 1.39
CXCL16-201ENST00000293778 DNM1Q05193 864 aaKnown RBP23.75■■□□□ 1.39
CXCL16-201ENST00000293778 STK3Q13188 491 aa23.75■■□□□ 1.39
CXCL16-201ENST00000293778 ESPNB1AK53 854 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 TTC39AQ5SRH9 613 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 SYTL4Q96C24 671 aaPredicted RBP23.74■■□□□ 1.39
CXCL16-201ENST00000293778 XAGE2Q96GT9 111 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 ROBO1Q9Y6N7 1651 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 ADORA1P30542 326 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 Q6ZUG5 572 aa23.74■■□□□ 1.39
CXCL16-201ENST00000293778 COL16A1Q07092 1604 aaPredicted RBP23.74■■□□□ 1.39
CXCL16-201ENST00000293778 MAST3O60307 1309 aa23.73■■□□□ 1.39
CXCL16-201ENST00000293778 SYNE4Q8N205 404 aa23.73■■□□□ 1.39
CXCL16-201ENST00000293778 TSPY26PQ9H489 355 aa23.73■■□□□ 1.39
CXCL16-201ENST00000293778 ZBTB1Q9Y2K1 713 aa23.73■■□□□ 1.39
CXCL16-201ENST00000293778 HMGB1P09429 215 aaKnown RBP23.72■■□□□ 1.39
CXCL16-201ENST00000293778 FKBP4Q02790 459 aaKnown RBP eCLIP23.72■■□□□ 1.39
CXCL16-201ENST00000293778 STOX1Q6ZVD7 989 aa23.72■■□□□ 1.39
CXCL16-201ENST00000293778 COL22A1Q8NFW1 1626 aaPredicted RBP23.72■■□□□ 1.39
CXCL16-201ENST00000293778 CLCN1P35523 988 aa23.72■■□□□ 1.39
CXCL16-201ENST00000293778 GTF3C6Q969F1 213 aa23.72■■□□□ 1.39
CXCL16-201ENST00000293778 HSPD1P10809 573 aaKnown RBP23.71■■□□□ 1.39
CXCL16-201ENST00000293778 LRRFIP1Q32MZ4 808 aaKnown RBP23.71■■□□□ 1.39
CXCL16-201ENST00000293778 CCDC183Q5T5S1 534 aa23.71■■□□□ 1.39
CXCL16-201ENST00000293778 CDC37L1Q7L3B6 337 aa23.71■■□□□ 1.39
CXCL16-201ENST00000293778 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
CXCL16-201ENST00000293778 TTLL11Q8NHH1 800 aa23.71■■□□□ 1.39
CXCL16-201ENST00000293778 AHDC1Q5TGY3 1603 aaPredicted RBP23.7■■□□□ 1.39
CXCL16-201ENST00000293778 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.38
CXCL16-201ENST00000293778 ITGA6P23229 1130 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 CTSWP56202 376 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 TPRNQ4KMQ1 711 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 RIC1Q4ADV7 1423 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 M0R2C6 588 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 FGD1P98174 961 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 DHX32Q7L7V1 743 aaKnown RBP23.69■■□□□ 1.38
CXCL16-201ENST00000293778 BRF1Q92994 677 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 GREM2Q9H772 168 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 WNK3Q9BYP7 1800 aa23.69■■□□□ 1.38
CXCL16-201ENST00000293778 METTL24Q5JXM2 366 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 LDHAL6AQ6ZMR3 332 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 FERMT3Q86UX7 667 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 TRMT112Q9UI30 125 aaKnown RBP23.68■■□□□ 1.38
CXCL16-201ENST00000293778 RIPOR2Q9Y4F9 1068 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 ANKRD18BA2A2Z9 1011 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 IRS4O14654 1257 aaPredicted RBP23.68■■□□□ 1.38
CXCL16-201ENST00000293778 ATP2B3Q16720 1220 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 RNF214Q8ND24 703 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 OSBP2Q969R2 916 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 PDLIM2Q96JY6 352 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 LRRC2Q9BYS8 371 aa23.68■■□□□ 1.38
CXCL16-201ENST00000293778 ERVV-1B6SEH8 477 aa23.67■■□□□ 1.38
CXCL16-201ENST00000293778 LETM1O95202 739 aaPredicted RBP23.67■■□□□ 1.38
CXCL16-201ENST00000293778 ZFYP08048 801 aaPredicted RBP23.67■■□□□ 1.38
CXCL16-201ENST00000293778 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
CXCL16-201ENST00000293778 KRT85P78386 507 aa23.67■■□□□ 1.38
CXCL16-201ENST00000293778 DZIP3Q86Y13 1208 aaKnown RBP23.67■■□□□ 1.38
CXCL16-201ENST00000293778 KAT6BQ8WYB5 2073 aa23.67■■□□□ 1.38
CXCL16-201ENST00000293778 ABCC12Q96J65 1359 aa23.67■■□□□ 1.38
CXCL16-201ENST00000293778 SCARF1Q14162 830 aa23.67■■□□□ 1.38
CXCL16-201ENST00000293778 LAMA4Q16363 1823 aa23.66■■□□□ 1.38
CXCL16-201ENST00000293778 E7EWF7 191 aa23.66■■□□□ 1.38
CXCL16-201ENST00000293778 JAK2O60674 1132 aa23.66■■□□□ 1.38
CXCL16-201ENST00000293778 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
CXCL16-201ENST00000293778 DOT1LQ8TEK3 1739 aa23.66■■□□□ 1.38
CXCL16-201ENST00000293778 ZAP70P43403 619 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms