RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.21
PTPRO-201ENST00000281171 CABS1Q96KC9 395 aa16.33■□□□□ 0.21
PTPRO-201ENST00000281171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.21
PTPRO-201ENST00000281171 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
PTPRO-201ENST00000281171 SATB1Q01826 763 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 CEP120Q8N960 986 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 DNAJC25Q9H1X3 360 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 LRRD1A4D1F6 860 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 CFAP58Q5T655 872 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 N4BP2L2Q92802 583 aaPredicted RBP16.33■□□□□ 0.2
PTPRO-201ENST00000281171 TMX3Q96JJ7 454 aa16.33■□□□□ 0.2
PTPRO-201ENST00000281171 SMIM24O75264 130 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 KRT18P05783 430 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 SETDB1Q15047 1291 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 CARD6Q9BX69 1037 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 CNPY2Q9Y2B0 182 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 ELP1O95163 1332 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 PPFIA3O75145 1194 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 BRD3Q15059 726 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 GPATCH8Q9UKJ3 1502 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 VAV2P52735 878 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 PNMA8AQ86V59 439 aaPredicted RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 TMOD3Q9NYL9 352 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 PPP1R12BO60237 982 aaPredicted RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 GJB2P29033 226 aa16.32■□□□□ 0.2
PTPRO-201ENST00000281171 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 TRIM6Q9C030 488 aaPredicted RBP16.32■□□□□ 0.2
PTPRO-201ENST00000281171 GSTTP1A0A1W2PQM5 241 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 ARHGAP45Q92619 1136 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 IRAK4Q9NWZ3 460 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 SH3GL3Q99963 347 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 GEMIN8Q9NWZ8 242 aaKnown RBP16.31■□□□□ 0.2
PTPRO-201ENST00000281171 STMN2Q93045 179 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 CCDC97Q96F63 343 aaPredicted RBP16.31■□□□□ 0.2
PTPRO-201ENST00000281171 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
PTPRO-201ENST00000281171 YY1AP1Q9H869 796 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 PPFIA1Q13136 1202 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 PIK3R5Q8WYR1 880 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRO-201ENST00000281171 CACNA2D4Q7Z3S7 1137 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-201ENST00000281171 TFIP11Q9UBB9 837 aaKnown RBP16.3■□□□□ 0.2
PTPRO-201ENST00000281171 SUFUQ9UMX1 484 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
PTPRO-201ENST00000281171 TNRQ92752 1358 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 JPH2Q9BR39 696 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 TACO1Q9BSH4 297 aaKnown RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 NOS1P29475 1434 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 FRMD3A2A2Y4 597 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 CETN3O15182 167 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 IRX1P78414 480 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 RFC1P35251 1148 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 AOPEPQ8N6M6 819 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 WHAMMQ8TF30 809 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 TPX2Q9ULW0 747 aaKnown RBP16.29■□□□□ 0.2
PTPRO-201ENST00000281171 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 BIN1O00499 593 aa16.29■□□□□ 0.2
PTPRO-201ENST00000281171 MYL6BP14649 208 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 AIDAQ96BJ3 306 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-201ENST00000281171 SMC6Q96SB8 1091 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 DNAI2Q9GZS0 605 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 A0A087WZG4 1122 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 IDI1Q13907 227 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 VCX3BQ9H321 246 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 VCX3AQ9NNX9 186 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 RNF10Q8N5U6 811 aaKnown RBP16.28■□□□□ 0.2
PTPRO-201ENST00000281171 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 SAAL1Q96ER3 474 aa16.28■□□□□ 0.2
PTPRO-201ENST00000281171 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 SELENOSQ9BQE4 189 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 DNA2P51530 1060 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 ZNF569Q5MCW4 686 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 ISM2Q6H9L7 571 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 ZNF215Q9UL58 517 aaPredicted RBP16.27■□□□□ 0.2
PTPRO-201ENST00000281171 PIK3R4Q99570 1358 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 CYLC1P35663 651 aaPredicted RBP16.27■□□□□ 0.2
PTPRO-201ENST00000281171 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
PTPRO-201ENST00000281171 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
PTPRO-201ENST00000281171 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.19
PTPRO-201ENST00000281171 MRFAP1Q9Y605 127 aa16.27■□□□□ 0.19
PTPRO-201ENST00000281171 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms