RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TTC14Q96N46 770 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 TAF5LO75529 589 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 SEPT12Q8IYM1 358 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 ZNF609O15014 1411 aa21.51■■□□□ 1.03
CAPN1-201ENST00000279247 ANKRD18BA2A2Z9 1011 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 SCARF1Q14162 830 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 VPS53Q5VIR6 699 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 SUSD4Q5VX71 490 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 KBTBD3Q8NAB2 608 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 PRPF40AO75400 957 aaKnown RBP21.5■■□□□ 1.03
CAPN1-201ENST00000279247 LIMCH1Q9UPQ0 1083 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 EIF5P55010 431 aaKnown RBP21.5■■□□□ 1.03
CAPN1-201ENST00000279247 CUL4AQ13619 759 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 CCDC158Q5M9N0 1113 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 NWD2Q9ULI1 1742 aa21.5■■□□□ 1.03
CAPN1-201ENST00000279247 NIP7Q9Y221 180 aaKnown RBP eCLIP21.49■■□□□ 1.03
CAPN1-201ENST00000279247 STK3Q13188 491 aa21.49■■□□□ 1.03
CAPN1-201ENST00000279247 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.48■■□□□ 1.03
CAPN1-201ENST00000279247 EPB41L2O43491 1005 aaKnown RBP21.48■■□□□ 1.03
CAPN1-201ENST00000279247 CIAO1O76071 339 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 CYP2E1P05181 493 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-201ENST00000279247 CSF1RP07333 972 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 MCMDC2Q4G0Z9 681 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 RNF20Q5VTR2 975 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 WASHC4Q2M389 1173 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 GDPD2Q9HCC8 539 aa21.48■■□□□ 1.03
CAPN1-201ENST00000279247 BLOC1S2Q6QNY1 142 aa21.47■■□□□ 1.03
CAPN1-201ENST00000279247 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
CAPN1-201ENST00000279247 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
CAPN1-201ENST00000279247 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
CAPN1-201ENST00000279247 ZAP70P43403 619 aa21.46■■□□□ 1.03
CAPN1-201ENST00000279247 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
CAPN1-201ENST00000279247 TRPC5Q9UL62 973 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-201ENST00000279247 PDE8AO60658 829 aa21.46■■□□□ 1.03
CAPN1-201ENST00000279247 AKAP2Q9Y2D5 859 aa21.46■■□□□ 1.03
CAPN1-201ENST00000279247 GPR108Q9NPR9 543 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 SMC3Q9UQE7 1217 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 ZNF34Q8IZ26 560 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 GOLGA6L3A6NEY3 463 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 ME3Q16798 604 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 PLA2G12BQ9BX93 195 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 RIPOR2Q9Y4F9 1068 aa21.45■■□□□ 1.02
CAPN1-201ENST00000279247 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 NUP98P52948 1817 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 IL27Q8NEV9 243 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 RTN4Q9NQC3 1192 aaKnown RBP21.44■■□□□ 1.02
CAPN1-201ENST00000279247 FGD1P98174 961 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 CCDC24Q8N4L8 307 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 INTS4Q96HW7 963 aaKnown RBP21.44■■□□□ 1.02
CAPN1-201ENST00000279247 TPCN1Q9ULQ1 816 aa21.44■■□□□ 1.02
CAPN1-201ENST00000279247 CYP21A2P08686 494 aa21.43■■□□□ 1.02
CAPN1-201ENST00000279247 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
CAPN1-201ENST00000279247 CDHR2Q9BYE9 1310 aa21.43■■□□□ 1.02
CAPN1-201ENST00000279247 CAMTA2O94983 1202 aa21.43■■□□□ 1.02
CAPN1-201ENST00000279247 PSMA5P28066 241 aa21.43■■□□□ 1.02
CAPN1-201ENST00000279247 CAVIN1Q6NZI2 390 aaKnown RBP21.43■■□□□ 1.02
CAPN1-201ENST00000279247 IL17RAQ96F46 866 aa21.43■■□□□ 1.02
CAPN1-201ENST00000279247 NAP1L2Q9ULW6 460 aaPredicted RBP21.43■■□□□ 1.02
CAPN1-201ENST00000279247 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
CAPN1-201ENST00000279247 MPHOSPH8Q99549 860 aa21.42■■□□□ 1.02
CAPN1-201ENST00000279247 LINC00116Q8NCU8 138 aa21.42■■□□□ 1.02
CAPN1-201ENST00000279247 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
CAPN1-201ENST00000279247 BRD1O95696 1058 aa21.42■■□□□ 1.02
CAPN1-201ENST00000279247 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
CAPN1-201ENST00000279247 M0R2C6 588 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 HAND2P61296 217 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 OSBP2Q969R2 916 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
CAPN1-201ENST00000279247 HSP90B1P14625 803 aaKnown RBP21.41■■□□□ 1.02
CAPN1-201ENST00000279247 GJB2P29033 226 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 LMBRD1Q9NUN5 540 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 MAST3O60307 1309 aa21.41■■□□□ 1.02
CAPN1-201ENST00000279247 IDH1O75874 414 aaKnown RBP21.4■■□□□ 1.02
CAPN1-201ENST00000279247 GTF2E1P29083 439 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-201ENST00000279247 TM6SF1Q9BZW5 370 aa21.4■■□□□ 1.02
CAPN1-201ENST00000279247 RBM27Q9P2N5 1060 aaKnown RBP21.4■■□□□ 1.02
CAPN1-201ENST00000279247 MCAMP43121 646 aa21.4■■□□□ 1.02
CAPN1-201ENST00000279247 PHKA1P46020 1223 aa21.4■■□□□ 1.02
CAPN1-201ENST00000279247 PANK2Q9BZ23 570 aa21.4■■□□□ 1.02
CAPN1-201ENST00000279247 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-201ENST00000279247 VPS37CA5D8V6 355 aaPredicted RBP21.39■■□□□ 1.02
CAPN1-201ENST00000279247 RPS6KB1P23443 525 aa21.39■■□□□ 1.02
CAPN1-201ENST00000279247 SMARCC1Q92922 1105 aaPredicted RBP21.39■■□□□ 1.02
CAPN1-201ENST00000279247 NEK1Q96PY6 1258 aa21.39■■□□□ 1.02
CAPN1-201ENST00000279247 SYT1P21579 422 aa21.39■■□□□ 1.01
CAPN1-201ENST00000279247 SKOR2Q2VWA4 1001 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-201ENST00000279247 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
CAPN1-201ENST00000279247 KCNB2Q92953 911 aa21.39■■□□□ 1.01
CAPN1-201ENST00000279247 RIC1Q4ADV7 1423 aa21.39■■□□□ 1.01
CAPN1-201ENST00000279247 ZMYM1Q5SVZ6 1142 aa21.39■■□□□ 1.01
CAPN1-201ENST00000279247 IQSEC3Q9UPP2 1182 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-201ENST00000279247 U3KPZ7 1027 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-201ENST00000279247 PDE8BO95263 885 aa21.38■■□□□ 1.01
CAPN1-201ENST00000279247 HSPD1P10809 573 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms