RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ZKSCAN5Q9Y2L8 839 aa29.83■■■□□ 2.37
ROM1-201ENST00000278833 NAP1L5Q96NT1 182 aaPredicted RBP29.82■■■□□ 2.37
ROM1-201ENST00000278833 NBPF26B4DH59 902 aa29.82■■■□□ 2.36
ROM1-201ENST00000278833 OFD1O75665 1012 aa29.82■■■□□ 2.36
ROM1-201ENST00000278833 NBPF14Q5TI25 921 aa29.82■■■□□ 2.36
ROM1-201ENST00000278833 NBPF10Q6P3W6 841 aaKnown RBP29.82■■■□□ 2.36
ROM1-201ENST00000278833 NBPF15Q8N660 670 aa29.82■■■□□ 2.36
ROM1-201ENST00000278833 ATG3Q9NT62 314 aa29.82■■■□□ 2.36
ROM1-201ENST00000278833 TERF1P54274 439 aa29.8■■■□□ 2.36
ROM1-201ENST00000278833 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.8■■■□□ 2.36
ROM1-201ENST00000278833 ILDR2Q71H61 639 aa29.8■■■□□ 2.36
ROM1-201ENST00000278833 KBTBD3Q8NAB2 608 aa29.8■■■□□ 2.36
ROM1-201ENST00000278833 ZCRB1Q8TBF4 217 aaKnown RBP29.8■■■□□ 2.36
ROM1-201ENST00000278833 CWC25Q9NXE8 425 aaPredicted RBP29.8■■■□□ 2.36
ROM1-201ENST00000278833 FOXD4L6Q3SYB3 417 aaPredicted RBP29.79■■■□□ 2.36
ROM1-201ENST00000278833 MCMDC2Q4G0Z9 681 aa29.79■■■□□ 2.36
ROM1-201ENST00000278833 FOXD4L3Q6VB84 417 aaPredicted RBP29.79■■■□□ 2.36
ROM1-201ENST00000278833 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.79■■■□□ 2.36
ROM1-201ENST00000278833 DBNDD2Q9BQY9 259 aa29.79■■■□□ 2.36
ROM1-201ENST00000278833 FUCA2Q9BTY2 467 aa29.79■■■□□ 2.36
ROM1-201ENST00000278833 DISP2A7MBM2 1401 aa29.79■■■□□ 2.36
ROM1-201ENST00000278833 IL2RBP14784 551 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 CCDC191Q8NCU4 936 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 THSD7AQ9UPZ6 1657 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 LAMA4Q16363 1823 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 FIBPO43427 364 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 DNM1Q05193 864 aaKnown RBP29.78■■■□□ 2.36
ROM1-201ENST00000278833 LMBR1LQ6UX01 489 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 NECAB1Q8N987 351 aa29.78■■■□□ 2.36
ROM1-201ENST00000278833 TOGARAM1Q9Y4F4 1720 aa29.77■■■□□ 2.36
ROM1-201ENST00000278833 ATP5J2-PTCD1G3V325 749 aa29.77■■■□□ 2.36
ROM1-201ENST00000278833 PTCD1O75127 700 aaKnown RBP29.77■■■□□ 2.36
ROM1-201ENST00000278833 CIAO1O76071 339 aa29.77■■■□□ 2.36
ROM1-201ENST00000278833 IL15P40933 162 aaPredicted RBP29.77■■■□□ 2.36
ROM1-201ENST00000278833 LARP1BQ659C4 914 aaKnown RBP29.77■■■□□ 2.36
ROM1-201ENST00000278833 ATG9AQ7Z3C6 839 aa29.77■■■□□ 2.36
ROM1-201ENST00000278833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.77■■■□□ 2.36
ROM1-201ENST00000278833 EP400Q96L91 3159 aa29.77■■■□□ 2.36
ROM1-201ENST00000278833 KRT85P78386 507 aa29.76■■■□□ 2.36
ROM1-201ENST00000278833 CDCA7Q9BWT1 371 aaPredicted RBP29.76■■■□□ 2.36
ROM1-201ENST00000278833 HELLSQ9NRZ9 838 aa29.76■■■□□ 2.36
ROM1-201ENST00000278833 WNK3Q9BYP7 1800 aa29.76■■■□□ 2.35
ROM1-201ENST00000278833 TPM2P07951 284 aa29.76■■■□□ 2.35
ROM1-201ENST00000278833 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.35
ROM1-201ENST00000278833 RNF214Q8ND24 703 aa29.75■■■□□ 2.35
ROM1-201ENST00000278833 EDC3Q96F86 508 aaKnown RBP29.75■■■□□ 2.35
ROM1-201ENST00000278833 NEK1Q96PY6 1258 aa29.75■■■□□ 2.35
ROM1-201ENST00000278833 TAF6LQ9Y6J9 622 aa29.75■■■□□ 2.35
ROM1-201ENST00000278833 VPS37CA5D8V6 355 aaPredicted RBP29.74■■■□□ 2.35
ROM1-201ENST00000278833 GTF3C6Q969F1 213 aa29.74■■■□□ 2.35
ROM1-201ENST00000278833 FBXO3Q9UK99 471 aa29.74■■■□□ 2.35
ROM1-201ENST00000278833 HMGB1P09429 215 aaKnown RBP29.74■■■□□ 2.35
ROM1-201ENST00000278833 DSCC1Q9BVC3 393 aa29.74■■■□□ 2.35
ROM1-201ENST00000278833 BRWD3Q6RI45 1802 aa29.73■■■□□ 2.35
ROM1-201ENST00000278833 COL9A3Q14050 684 aaPredicted RBP29.72■■■□□ 2.35
ROM1-201ENST00000278833 DDB1Q16531 1140 aa29.72■■■□□ 2.35
ROM1-201ENST00000278833 CDC37L1Q7L3B6 337 aa29.72■■■□□ 2.35
ROM1-201ENST00000278833 JARID2Q92833 1246 aaPredicted RBP29.72■■■□□ 2.35
ROM1-201ENST00000278833 MYH15Q9Y2K3 1946 aa29.71■■■□□ 2.35
ROM1-201ENST00000278833 TTLL7Q6ZT98 887 aa29.71■■■□□ 2.35
ROM1-201ENST00000278833 DDX54Q8TDD1 881 aaKnown RBP29.71■■■□□ 2.35
ROM1-201ENST00000278833 SCAND2PQ9GZW5 306 aaPredicted RBP29.71■■■□□ 2.35
ROM1-201ENST00000278833 EYA2O00167 538 aa29.7■■■□□ 2.35
ROM1-201ENST00000278833 LLPHQ9BRT6 129 aaKnown RBP29.7■■■□□ 2.35
ROM1-201ENST00000278833 ZMYM1Q5SVZ6 1142 aa29.7■■■□□ 2.34
ROM1-201ENST00000278833 DNAJC2Q99543 621 aaKnown RBP29.7■■■□□ 2.34
ROM1-201ENST00000278833 ISCA1Q9BUE6 129 aa29.7■■■□□ 2.34
ROM1-201ENST00000278833 EXOC5O00471 708 aa29.69■■■□□ 2.34
ROM1-201ENST00000278833 CYP21A2P08686 494 aa29.69■■■□□ 2.34
ROM1-201ENST00000278833 TTC6Q86TZ1 520 aa29.69■■■□□ 2.34
ROM1-201ENST00000278833 AGXT2Q9BYV1 514 aa29.69■■■□□ 2.34
ROM1-201ENST00000278833 TRIM28Q13263 835 aaKnown RBP29.68■■■□□ 2.34
ROM1-201ENST00000278833 KRT27Q7Z3Y8 459 aa29.68■■■□□ 2.34
ROM1-201ENST00000278833 PAG1Q9NWQ8 432 aa29.68■■■□□ 2.34
ROM1-201ENST00000278833 ABCC12Q96J65 1359 aa29.68■■■□□ 2.34
ROM1-201ENST00000278833 SMARCC2Q8TAQ2 1214 aa29.67■■■□□ 2.34
ROM1-201ENST00000278833 DDX46Q7L014 1031 aaKnown RBP29.66■■■□□ 2.34
ROM1-201ENST00000278833 FAM182BQ5T319 152 aa29.65■■■□□ 2.34
ROM1-201ENST00000278833 PLA2G12BQ9BX93 195 aa29.65■■■□□ 2.34
ROM1-201ENST00000278833 TCEANC2Q96MN5 208 aa29.65■■■□□ 2.34
ROM1-201ENST00000278833 PFKFB2O60825 505 aa29.64■■■□□ 2.34
ROM1-201ENST00000278833 Q6ZUG5 572 aa29.64■■■□□ 2.34
ROM1-201ENST00000278833 FBXL16Q8N461 479 aa29.64■■■□□ 2.34
ROM1-201ENST00000278833 HCLS1P14317 486 aaPredicted RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 CCDC129Q6ZRS4 1044 aa29.63■■■□□ 2.33
ROM1-201ENST00000278833 VSIG10Q8N0Z9 540 aa29.63■■■□□ 2.33
ROM1-201ENST00000278833 SEC62Q99442 399 aaKnown RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 DDX60Q8IY21 1712 aaKnown RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 A1BGP04217 495 aa29.63■■■□□ 2.33
ROM1-201ENST00000278833 RBM43Q6ZSC3 357 aaKnown RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 DHX32Q7L7V1 743 aaKnown RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 ZSCAN16Q9H4T2 348 aaPredicted RBP29.63■■■□□ 2.33
ROM1-201ENST00000278833 ANKRD36CQ5JPF3 1778 aa29.62■■■□□ 2.33
ROM1-201ENST00000278833 RESTQ13127 1097 aa29.62■■■□□ 2.33
ROM1-201ENST00000278833 CHMP4CQ96CF2 233 aa29.62■■■□□ 2.33
ROM1-201ENST00000278833 KDM4AO75164 1064 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 STOX1Q6ZVD7 989 aa29.61■■■□□ 2.33
ROM1-201ENST00000278833 MARCH10Q8NA82 808 aaPredicted RBP29.61■■■□□ 2.33
ROM1-201ENST00000278833 TEX13AQ9BXU3 409 aaPredicted RBP29.61■■■□□ 2.33
ROM1-201ENST00000278833 DDX19AQ9NUU7 478 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms