RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 AVENQ9NQS1 362 aaPredicted RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 VIRMAQ69YN4 1812 aaKnown RBP3.74□□□□□ -1.81
HERC4-201ENST00000277817 TULP4Q9NRJ4 1543 aa3.74□□□□□ -1.81
HERC4-201ENST00000277817 MAP9Q49MG5 647 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 GORABQ5T7V8 394 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 PNISRQ8TF01 805 aaKnown RBP3.73□□□□□ -1.81
HERC4-201ENST00000277817 AK5Q9Y6K8 562 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 GALR2O43603 387 aaPredicted RBP3.73□□□□□ -1.81
HERC4-201ENST00000277817 NEFMP07197 916 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 ZNF69Q9UC07 566 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 CFDP1Q9UEE9 299 aaPredicted RBP3.73□□□□□ -1.81
HERC4-201ENST00000277817 WASLO00401 505 aaPredicted RBP3.73□□□□□ -1.81
HERC4-201ENST00000277817 SLC4A3P48751 1232 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 STAG2Q8N3U4 1231 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 OCEL1Q9H607 264 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 FKBPLQ9UIM3 349 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 IQSEC3Q9UPP2 1182 aaPredicted RBP3.73□□□□□ -1.81
HERC4-201ENST00000277817 PCDHGA4Q9Y5G9 962 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 C5P01031 1676 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 ADGRL3Q9HAR2 1447 aa3.73□□□□□ -1.81
HERC4-201ENST00000277817 RASA1P20936 1047 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 GNALP38405 381 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 BSDC1Q9NW68 430 aaPredicted RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 WWC3Q9ULE0 1092 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 TRIM35Q9UPQ4 493 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 RBBP6Q7Z6E9 1792 aaKnown RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 RGS12O14924 1447 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 PTCD1O75127 700 aaKnown RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 SKIP12755 728 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ST13P50502 369 aaKnown RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 ZNF394Q53GI3 561 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ZNF654Q8IZM8 581 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 DMRTB1Q96MA1 342 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 FAM161BQ96MY7 647 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 DUSP9Q99956 384 aaKnown RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 MAP3K5Q99683 1374 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 KLRG2A4D1S0 409 aaPredicted RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 PEX14O75381 377 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 RAPGEF3O95398 923 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ZNF76P36508 570 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ARID5AQ03989 594 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 WDR43Q15061 677 aaKnown RBP eCLIP3.72□□□□□ -1.81
HERC4-201ENST00000277817 CSPP1Q1MSJ5 1256 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 EFCAB2Q5VUJ9 269 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 NUTM1Q86Y26 1132 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 TMEM87AQ8NBN3 555 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ZSWIM4Q9H7M6 989 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 GABBR1Q9UBS5 961 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 ZNF646O15015 1829 aaPredicted RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 C19orf67A6NJJ6 358 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 SOX9P48436 509 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 NFE2L2Q16236 605 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 LONRF3Q496Y0 759 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 SPATA31E1Q6ZUB1 1445 aa3.72□□□□□ -1.81
HERC4-201ENST00000277817 DNAAF2Q9NVR5 837 aaKnown RBP3.72□□□□□ -1.81
HERC4-201ENST00000277817 NCAPD2Q15021 1401 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SPATA31A6Q5VVP1 1343 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 FAM163BP0C2L3 166 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SH3RF1Q7Z6J0 888 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 DEPDC4Q8N2C3 294 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 LILRB2Q8N423 598 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SLC39A7Q92504 469 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 CARD11Q9BXL7 1154 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 FOXK2Q01167 660 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 ZNF295-AS1Q8N0V1 137 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 CRELD1Q96HD1 420 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 FAM126AQ9BYI3 521 aaPredicted RBP3.71□□□□□ -1.82
HERC4-201ENST00000277817 SPC25Q9HBM1 224 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 CAPN10Q9HC96 672 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 NRBP1Q9UHY1 535 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SIPA1L3O60292 1781 aaPredicted RBP3.71□□□□□ -1.82
HERC4-201ENST00000277817 IFRD1O00458 451 aaPredicted RBP3.71□□□□□ -1.82
HERC4-201ENST00000277817 MASP1P48740 699 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 TMEM95Q3KNT9 176 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SLFNL1Q499Z3 407 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 ARSHQ5FYA8 562 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 SIRPGQ9P1W8 387 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 ATP7BP35670 1465 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 ANKARQ7Z5J8 1434 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 ADAMTSL1Q8N6G6 1762 aa3.71□□□□□ -1.82
HERC4-201ENST00000277817 EXOSC10Q01780 885 aaKnown RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 HSP90AB2PQ58FF8 381 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 LARP1Q6PKG0 1096 aaKnown RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 PODNQ7Z5L7 613 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 HELBQ8NG08 1087 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 THAP11Q96EK4 314 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 RBM33Q96EV2 1170 aaKnown RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 SORBS3O60504 671 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 DNAJC6O75061 913 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 PAX3P23760 479 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 GRIPAP1Q4V328 841 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 SH3BP5LQ7L8J4 393 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 ATXN2LQ8WWM7 1075 aaKnown RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 ZDHHC16Q969W1 377 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 CCDC113Q9H0I3 377 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 IGFBP4P22692 258 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 GTF2F1P35269 517 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC4-201ENST00000277817 CDKN1CP49918 316 aaPredicted RBP3.7□□□□□ -1.82
HERC4-201ENST00000277817 FMNL3Q8IVF7 1028 aa3.7□□□□□ -1.82
HERC4-201ENST00000277817 FBF1Q8TES7 1133 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms