RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 CHMP4BP1P59074 171 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
USP6NL-201ENST00000277575 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
USP6NL-201ENST00000277575 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 SNX21Q969T3 373 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
USP6NL-201ENST00000277575 AMPD3Q01432 767 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 CCDC191Q8NCU4 936 aa13□□□□□ -0.33
USP6NL-201ENST00000277575 GNAT2P19087 354 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
USP6NL-201ENST00000277575 PICALMQ13492 652 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
USP6NL-201ENST00000277575 SPA17Q15506 151 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
USP6NL-201ENST00000277575 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
USP6NL-201ENST00000277575 STX1AQ16623 288 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 ANKRD2Q9GZV1 360 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 MCM9Q9NXL9 1143 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 ARHGEF10O15013 1369 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 A0A1B0GUL7 405 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 KANK3Q6NY19 840 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 PYM1Q9BRP8 204 aaKnown RBP12.98□□□□□ -0.33
USP6NL-201ENST00000277575 SBNO2Q9Y2G9 1366 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 USP19O94966 1318 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 ERLIN1O75477 346 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-201ENST00000277575 RBM10P98175 930 aaKnown RBP12.98□□□□□ -0.33
USP6NL-201ENST00000277575 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 TAF4BQ92750 862 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
USP6NL-201ENST00000277575 SYKP43405 635 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
USP6NL-201ENST00000277575 RAD50Q92878 1312 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 CAVIN2O95810 425 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 BMP15O95972 392 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 AK2P54819 239 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 DHX32Q7L7V1 743 aaKnown RBP12.97□□□□□ -0.33
USP6NL-201ENST00000277575 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-201ENST00000277575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
USP6NL-201ENST00000277575 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-201ENST00000277575 PLCG2P16885 1265 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 ITGA6P23229 1130 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 MTIF2P46199 727 aaKnown RBP12.97□□□□□ -0.33
USP6NL-201ENST00000277575 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 DBNDD2Q9BQY9 259 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 UBXN4Q92575 508 aa12.97□□□□□ -0.33
USP6NL-201ENST00000277575 CNPY2Q9Y2B0 182 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 LDHBP07195 334 aaKnown RBP12.96□□□□□ -0.33
USP6NL-201ENST00000277575 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
USP6NL-201ENST00000277575 TRAF1Q13077 416 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 VPS36Q86VN1 386 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 JAG2Q9Y219 1238 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 ZFYVE16Q7Z3T8 1539 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 PRKCSHP14314 528 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-201ENST00000277575 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
USP6NL-201ENST00000277575 IQCEQ6IPM2 695 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
USP6NL-201ENST00000277575 POTEJP0CG39 1038 aa12.96□□□□□ -0.34
USP6NL-201ENST00000277575 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.34
USP6NL-201ENST00000277575 SEC24BO95487 1268 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
USP6NL-201ENST00000277575 GCKRQ14397 625 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 GOLGA6L10A6NI86 522 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 F13A1P00488 732 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 DNM1Q05193 864 aaKnown RBP12.95□□□□□ -0.34
USP6NL-201ENST00000277575 APOBRQ0VD83 1088 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
USP6NL-201ENST00000277575 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-201ENST00000277575 PDE8AO60658 829 aa12.95□□□□□ -0.34
USP6NL-201ENST00000277575 UQCRHLA0A096LP55 91 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 UQCRHP07919 91 aa12.94□□□□□ -0.34
USP6NL-201ENST00000277575 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms