RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 OVOS2A0A0G2JMS6 1433 aa13.76□□□□□ -0.21
LRTM1-201ENST00000273286 OVOS2A0A0J9YW53 1432 aa13.76□□□□□ -0.21
LRTM1-201ENST00000273286 OVOS2Q6IE36 1432 aa13.76□□□□□ -0.21
LRTM1-201ENST00000273286 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
LRTM1-201ENST00000273286 TTC21AQ8NDW8 1320 aa13.76□□□□□ -0.21
LRTM1-201ENST00000273286 SCTRP47872 440 aa13.75□□□□□ -0.21
LRTM1-201ENST00000273286 PRM3Q9NNZ6 103 aa13.75□□□□□ -0.21
LRTM1-201ENST00000273286 RREB1Q92766 1687 aa13.74□□□□□ -0.21
LRTM1-201ENST00000273286 MEN1O00255 615 aa13.74□□□□□ -0.21
LRTM1-201ENST00000273286 ITGA6P23229 1130 aa13.74□□□□□ -0.21
LRTM1-201ENST00000273286 LYSMD3Q7Z3D4 306 aa13.74□□□□□ -0.21
LRTM1-201ENST00000273286 GPR161Q8N6U8 529 aaKnown RBP13.74□□□□□ -0.21
LRTM1-201ENST00000273286 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
LRTM1-201ENST00000273286 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 NANOS1Q8WY41 292 aaKnown RBP13.73□□□□□ -0.21
LRTM1-201ENST00000273286 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 PIK3C2AO00443 1686 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 CPSF1Q10570 1443 aaKnown RBP13.73□□□□□ -0.21
LRTM1-201ENST00000273286 ABCC6O95255 1503 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 RNF144AP50876 292 aaPredicted RBP13.73□□□□□ -0.21
LRTM1-201ENST00000273286 DDB1Q16531 1140 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
LRTM1-201ENST00000273286 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
LRTM1-201ENST00000273286 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
LRTM1-201ENST00000273286 CDC14CA4D256 554 aa13.72□□□□□ -0.21
LRTM1-201ENST00000273286 PLSCR1O15162 318 aa13.72□□□□□ -0.21
LRTM1-201ENST00000273286 PRICKLE2Q7Z3G6 844 aa13.72□□□□□ -0.21
LRTM1-201ENST00000273286 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
LRTM1-201ENST00000273286 BCL9O00512 1426 aa13.71□□□□□ -0.21
LRTM1-201ENST00000273286 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.21
LRTM1-201ENST00000273286 A0A1W2PRU2 124 aa13.71□□□□□ -0.22
LRTM1-201ENST00000273286 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.22
LRTM1-201ENST00000273286 ARHGEF25Q86VW2 580 aa13.71□□□□□ -0.22
LRTM1-201ENST00000273286 LRRC37A3O60309 1634 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 COL18A1P39060 1754 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 AKAP12Q02952 1782 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 RHOQP17081 205 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 KRT76Q01546 638 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
LRTM1-201ENST00000273286 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
LRTM1-201ENST00000273286 IRF5Q13568 498 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 VWA5B2Q8N398 1253 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 CNTNAP3BQ96NU0 1288 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 CNTNAP3Q9BZ76 1288 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
LRTM1-201ENST00000273286 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
LRTM1-201ENST00000273286 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
LRTM1-201ENST00000273286 COL25A1Q9BXS0 654 aaPredicted RBP13.68□□□□□ -0.22
LRTM1-201ENST00000273286 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
LRTM1-201ENST00000273286 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
LRTM1-201ENST00000273286 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
LRTM1-201ENST00000273286 GPC1P35052 558 aa13.67□□□□□ -0.22
LRTM1-201ENST00000273286 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
LRTM1-201ENST00000273286 SV2AQ7L0J3 742 aa13.67□□□□□ -0.22
LRTM1-201ENST00000273286 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
LRTM1-201ENST00000273286 SPON1Q9HCB6 807 aa13.67□□□□□ -0.22
LRTM1-201ENST00000273286 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
LRTM1-201ENST00000273286 TRAK2O60296 914 aa13.66□□□□□ -0.22
LRTM1-201ENST00000273286 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
LRTM1-201ENST00000273286 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
LRTM1-201ENST00000273286 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
LRTM1-201ENST00000273286 MON2Q7Z3U7 1717 aa13.66□□□□□ -0.22
LRTM1-201ENST00000273286 EXOC5O00471 708 aa13.65□□□□□ -0.22
LRTM1-201ENST00000273286 CLN3Q13286 438 aa13.65□□□□□ -0.22
LRTM1-201ENST00000273286 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
LRTM1-201ENST00000273286 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
LRTM1-201ENST00000273286 NFAT5O94916 1531 aa13.65□□□□□ -0.22
LRTM1-201ENST00000273286 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
LRTM1-201ENST00000273286 ABL2P42684 1182 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
LRTM1-201ENST00000273286 KCNQ2O43526 872 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 VAC14Q08AM6 782 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 RNFT1Q5M7Z0 435 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 RAB6BQ9NRW1 208 aa13.64□□□□□ -0.23
LRTM1-201ENST00000273286 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
LRTM1-201ENST00000273286 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
LRTM1-201ENST00000273286 MYCP01106 439 aaPredicted RBP13.63□□□□□ -0.23
LRTM1-201ENST00000273286 MCM6Q14566 821 aa13.63□□□□□ -0.23
LRTM1-201ENST00000273286 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
LRTM1-201ENST00000273286 TERF2IPQ9NYB0 399 aa13.63□□□□□ -0.23
LRTM1-201ENST00000273286 TNS2Q63HR2 1409 aa13.63□□□□□ -0.23
LRTM1-201ENST00000273286 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
LRTM1-201ENST00000273286 CUEDC1Q9NWM3 386 aaPredicted RBP13.62□□□□□ -0.23
LRTM1-201ENST00000273286 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
LRTM1-201ENST00000273286 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
LRTM1-201ENST00000273286 POU4F2Q12837 409 aa13.6□□□□□ -0.23
LRTM1-201ENST00000273286 SLFNL1Q499Z3 407 aa13.6□□□□□ -0.23
LRTM1-201ENST00000273286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
LRTM1-201ENST00000273286 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
LRTM1-201ENST00000273286 DOLKQ9UPQ8 538 aa13.6□□□□□ -0.23
LRTM1-201ENST00000273286 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
LRTM1-201ENST00000273286 GNRH1P01148 92 aa13.59□□□□□ -0.23
LRTM1-201ENST00000273286 RNF135Q8IUD6 432 aa13.59□□□□□ -0.23
LRTM1-201ENST00000273286 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
LRTM1-201ENST00000273286 IL2RBP14784 551 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms