RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CNNM2Q9H8M5 875 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 INSRP06213 1382 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 TTLL12Q14166 644 aaPredicted RBP17.82■□□□□ 0.44
TIMP3-201ENST00000266085 Q6ZUG5 572 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 ITGA6P23229 1130 aa17.82■□□□□ 0.44
TIMP3-201ENST00000266085 GCKRQ14397 625 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 WDR78Q5VTH9 848 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 DBNDD2Q9BQY9 259 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 TSPOAP1O95153 1857 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 CUL5Q93034 780 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 JAG2Q9Y219 1238 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
TIMP3-201ENST00000266085 SEC24BO95487 1268 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 TSPY3P0CV98 308 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 TSPY8P0CW00 308 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 ARHGAP29Q52LW3 1261 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 SUCLG2Q96I99 432 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 ZNF594Q96JF6 807 aaPredicted RBP17.81■□□□□ 0.44
TIMP3-201ENST00000266085 PARP3Q9Y6F1 533 aa17.81■□□□□ 0.44
TIMP3-201ENST00000266085 BLMP54132 1417 aaPredicted RBP17.8■□□□□ 0.44
TIMP3-201ENST00000266085 USP25Q9UHP3 1055 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 PPP1R12BO60237 982 aaPredicted RBP17.8■□□□□ 0.44
TIMP3-201ENST00000266085 PHKG2P15735 406 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
TIMP3-201ENST00000266085 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 PRC1O43663 620 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 CHST3Q7LGC8 479 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 CNBD1Q8NA66 436 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 TCP11L1Q9NUJ3 509 aa17.8■□□□□ 0.44
TIMP3-201ENST00000266085 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
TIMP3-201ENST00000266085 CREB3L3Q68CJ9 461 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 PICALMQ13492 652 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 VSIG10Q8N0Z9 540 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
TIMP3-201ENST00000266085 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 MYO1BO43795 1136 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 UBA7P41226 1012 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 ZNF165P49910 485 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 RTN1Q16799 776 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 TNNI3KQ59H18 835 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 ALG1Q9BT22 464 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 FPGT-TNNI3KV9GXZ4 949 aa17.79■□□□□ 0.44
TIMP3-201ENST00000266085 MYOM2P54296 1465 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 PDE8AO60658 829 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 USP21Q9UK80 565 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 NLRP1Q9C000 1473 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 NPHP4O75161 1426 aaPredicted RBP17.78■□□□□ 0.44
TIMP3-201ENST00000266085 BIN1O00499 593 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
TIMP3-201ENST00000266085 ZNF397Q8NF99 534 aaPredicted RBP17.77■□□□□ 0.44
TIMP3-201ENST00000266085 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
TIMP3-201ENST00000266085 CCDC102BQ68D86 513 aa17.77■□□□□ 0.44
TIMP3-201ENST00000266085 RAD50Q92878 1312 aa17.77■□□□□ 0.43
TIMP3-201ENST00000266085 CAVIN2O95810 425 aa17.77■□□□□ 0.43
TIMP3-201ENST00000266085 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.43
TIMP3-201ENST00000266085 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.43
TIMP3-201ENST00000266085 GNAT2P19087 354 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 AK2P54819 239 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 HECW2Q9P2P5 1572 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 SETQ01105 290 aaPredicted RBP17.76■□□□□ 0.43
TIMP3-201ENST00000266085 FAM135BQ49AJ0 1406 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 FKBP15Q5T1M5 1219 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 SEPT11Q9NVA2 429 aaKnown RBP17.76■□□□□ 0.43
TIMP3-201ENST00000266085 KIF20AO95235 890 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
TIMP3-201ENST00000266085 KIAA1328Q86T90 577 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
TIMP3-201ENST00000266085 STX1AQ16623 288 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 CCDC24Q8N4L8 307 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 HDAC9Q9UKV0 1011 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 KIF2AO00139 706 aaPredicted RBP17.75■□□□□ 0.43
TIMP3-201ENST00000266085 CCDC178Q5BJE1 867 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 TSG101Q99816 390 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 IDEP14735 1019 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 DHX32Q7L7V1 743 aaKnown RBP17.75■□□□□ 0.43
TIMP3-201ENST00000266085 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
TIMP3-201ENST00000266085 PYM1Q9BRP8 204 aaKnown RBP17.75■□□□□ 0.43
TIMP3-201ENST00000266085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.75■□□□□ 0.432e-6■■■■■ 96.1
TIMP3-201ENST00000266085 FGFR1OPO95684 399 aaKnown RBP17.74■□□□□ 0.43
TIMP3-201ENST00000266085 GNAQP50148 359 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
TIMP3-201ENST00000266085 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
TIMP3-201ENST00000266085 PUM3Q15397 648 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms