RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CCDC102BQ68D86 513 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 KLHL10Q6JEL2 608 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 CDR1P51861 262 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
PHRF1-201ENST00000264555 CCDC191Q8NCU4 936 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 ESR2Q92731 530 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 ALG1Q9BT22 464 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 MAP3K4Q9Y6R4 1608 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 RFC4P35249 363 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 CROCC2H7BZ55 1655 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 EYA2O00167 538 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
PHRF1-201ENST00000264555 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 BIN1O00499 593 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 ZNF76P36508 570 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 SUCLG2Q96I99 432 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 KAT14Q9H8E8 782 aa19.33■□□□□ 0.69
PHRF1-201ENST00000264555 SETDB2Q96T68 719 aa19.33■□□□□ 0.68
PHRF1-201ENST00000264555 RAB34Q9BZG1 259 aa19.33■□□□□ 0.68
PHRF1-201ENST00000264555 DACT1Q9NYF0 836 aa19.33■□□□□ 0.68
PHRF1-201ENST00000264555 GCKRQ14397 625 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 CCDC12Q8WUD4 166 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-201ENST00000264555 NLRP3Q96P20 1036 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 GNAT2P19087 354 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 SYT1P21579 422 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 PRIM1P49642 420 aaKnown RBP19.32■□□□□ 0.68
PHRF1-201ENST00000264555 ARHGAP29Q52LW3 1261 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 FAM200AQ8TCP9 573 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 PYM1Q9BRP8 204 aaKnown RBP19.32■□□□□ 0.68
PHRF1-201ENST00000264555 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
PHRF1-201ENST00000264555 PANK2Q9BZ23 570 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 USP44Q9H0E7 712 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 GSTO1P78417 241 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 MRPS27Q92552 414 aaKnown RBP19.32■□□□□ 0.68
PHRF1-201ENST00000264555 SNX14Q9Y5W7 946 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 BCORL1Q5H9F3 1711 aa19.32■□□□□ 0.68
PHRF1-201ENST00000264555 SYCP1Q15431 976 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 RTN1Q16799 776 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 SSH3Q8TE77 659 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 ODF2Q5BJF6 829 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 NLRP1Q9C000 1473 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 SYKP43405 635 aa19.31■□□□□ 0.68
PHRF1-201ENST00000264555 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 APOBRQ0VD83 1088 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 ZNF397Q8NF99 534 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-201ENST00000264555 GIGYF1O75420 1035 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-201ENST00000264555 ERLIN1O75477 346 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 KLHDC4Q8TBB5 520 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 MYO6Q9UM54 1294 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 RRP9O43818 475 aaKnown RBP19.3■□□□□ 0.68
PHRF1-201ENST00000264555 GSPT1P15170 499 aaKnown RBP19.3■□□□□ 0.68
PHRF1-201ENST00000264555 TMEM266Q2M3C6 531 aa19.3■□□□□ 0.68
PHRF1-201ENST00000264555 ZNF496Q96IT1 587 aaPredicted RBP19.3■□□□□ 0.68
PHRF1-201ENST00000264555 A0A1B0GUL7 405 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 SLC27A2O14975 620 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 USP6P35125 1406 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 TIMM10P62072 90 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
PHRF1-201ENST00000264555 BTG4Q9NY30 223 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 CPA1P15085 419 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 ANO6Q4KMQ2 910 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 IQSEC3Q9UPP2 1182 aaPredicted RBP19.29■□□□□ 0.68
PHRF1-201ENST00000264555 TOM1O60784 492 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 BMP15O95972 392 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 PTPDC1A2A3K4 754 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 IFIT1BQ5T764 474 aaKnown RBP19.29■□□□□ 0.68
PHRF1-201ENST00000264555 UBXN4Q92575 508 aa19.29■□□□□ 0.68
PHRF1-201ENST00000264555 IGSF1Q8N6C5 1336 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 CCDC178Q5BJE1 867 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 CCDC181Q5TID7 509 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 NYXQ9GZU5 481 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 SETQ01105 290 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-201ENST00000264555 CCDC96Q2M329 555 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 TNNT1P13805 278 aa19.28■□□□□ 0.68
PHRF1-201ENST00000264555 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
PHRF1-201ENST00000264555 CHST3Q7LGC8 479 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 TCP11L1Q9NUJ3 509 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 HSPA4P34932 840 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 ST5P78524 1137 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 KIAA1328Q86T90 577 aa19.27■□□□□ 0.68
PHRF1-201ENST00000264555 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
PHRF1-201ENST00000264555 CLCN1P35523 988 aa19.27■□□□□ 0.67
PHRF1-201ENST00000264555 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.67
PHRF1-201ENST00000264555 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 IQCEQ6IPM2 695 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
PHRF1-201ENST00000264555 KDRP35968 1356 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 CDK12Q9NYV4 1490 aaPredicted RBP19.26■□□□□ 0.67
PHRF1-201ENST00000264555 MAGEB6Q8N7X4 407 aa19.26■□□□□ 0.67
PHRF1-201ENST00000264555 KCNQ3O43525 872 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms