RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 BRF1Q92994 677 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
HACD3-201ENST00000261875 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 SIK1P57059 783 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 GUCY1B3Q02153 619 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 ATP2B3Q16720 1220 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 CCDC158Q5M9N0 1113 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 RNF20Q5VTR2 975 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 HAUS7Q99871 368 aa15.72■□□□□ 0.11
HACD3-201ENST00000261875 TCHHQ07283 1943 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 N4BP2Q86UW6 1770 aaPredicted RBP15.71■□□□□ 0.11
HACD3-201ENST00000261875 ROBO1Q9Y6N7 1651 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 NPHP1O15259 732 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 GTF2E1P29083 439 aaPredicted RBP15.71■□□□□ 0.11
HACD3-201ENST00000261875 M0R2C6 588 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 CUL4AQ13619 759 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 MCMDC2Q4G0Z9 681 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
HACD3-201ENST00000261875 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
HACD3-201ENST00000261875 NCOA5Q9HCD5 579 aaKnown RBP15.71■□□□□ 0.11
HACD3-201ENST00000261875 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.1
HACD3-201ENST00000261875 HIP1O00291 1037 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 PHF14O94880 888 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 BRD1O95696 1058 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 SUSD4Q5VX71 490 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 Q6ZUG5 572 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 TMEM63CQ9P1W3 806 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 ERBB4Q15303 1308 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 TUBGCP6Q96RT7 1819 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 STX6O43752 255 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 DNM1Q05193 864 aaKnown RBP15.7■□□□□ 0.1
HACD3-201ENST00000261875 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 CTSWP56202 376 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 ZSCAN23Q3MJ62 389 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
HACD3-201ENST00000261875 TFIP11Q9UBB9 837 aaKnown RBP15.7■□□□□ 0.1
HACD3-201ENST00000261875 TOGARAM1Q9Y4F4 1720 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 PHKA1P46020 1223 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 USP48Q86UV5 1035 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 PCCAP05165 728 aaPredicted RBP15.69■□□□□ 0.1
HACD3-201ENST00000261875 APOBRQ0VD83 1088 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
HACD3-201ENST00000261875 ZSWIM6Q9HCJ5 1215 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 DENND2AQ9ULE3 1009 aa15.69■□□□□ 0.1
HACD3-201ENST00000261875 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 NEK1Q96PY6 1258 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
HACD3-201ENST00000261875 UTRNP46939 3433 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 MAST3O60307 1309 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 KLHL40Q2TBA0 621 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 MPHOSPH8Q99549 860 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
HACD3-201ENST00000261875 BCL9O00512 1426 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 GLI3P10071 1580 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 CDC37L1Q7L3B6 337 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
HACD3-201ENST00000261875 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
HACD3-201ENST00000261875 RPAP1Q9BWH6 1393 aaPredicted RBP15.67■□□□□ 0.1
HACD3-201ENST00000261875 RXRAP19793 462 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
HACD3-201ENST00000261875 SLC51AQ86UW1 340 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 PUS7LQ9H0K6 701 aaKnown RBP15.67■□□□□ 0.1
HACD3-201ENST00000261875 RPS6KB1P23443 525 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 SLC4A8Q2Y0W8 1093 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 INCENPQ9NQS7 918 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 WDR33Q9C0J8 1336 aaKnown RBP15.67■□□□□ 0.1
HACD3-201ENST00000261875 ABCA3Q99758 1704 aa15.67■□□□□ 0.1
HACD3-201ENST00000261875 PSMA5P28066 241 aa15.66■□□□□ 0.1
HACD3-201ENST00000261875 MCAMP43121 646 aa15.66■□□□□ 0.1
HACD3-201ENST00000261875 SRP68Q9UHB9 627 aaKnown RBP15.66■□□□□ 0.1
HACD3-201ENST00000261875 MED23Q9ULK4 1368 aa15.66■□□□□ 0.1
HACD3-201ENST00000261875 TOB2Q14106 344 aaPredicted RBP15.66■□□□□ 0.1
HACD3-201ENST00000261875 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
HACD3-201ENST00000261875 SLC9C2Q5TAH2 1124 aa15.66■□□□□ 0.1
HACD3-201ENST00000261875 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
HACD3-201ENST00000261875 HSPD1P10809 573 aaKnown RBP15.65■□□□□ 0.1
HACD3-201ENST00000261875 FSD2A1L4K1 749 aa15.65■□□□□ 0.1
HACD3-201ENST00000261875 RNF113AO15541 343 aaKnown RBP15.65■□□□□ 0.1
HACD3-201ENST00000261875 NASPP49321 788 aaPredicted RBP15.65■□□□□ 0.1
HACD3-201ENST00000261875 MRE11P49959 708 aa15.65■□□□□ 0.1
HACD3-201ENST00000261875 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
HACD3-201ENST00000261875 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
HACD3-201ENST00000261875 TOM1O60784 492 aa15.64■□□□□ 0.09
HACD3-201ENST00000261875 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
HACD3-201ENST00000261875 INTS5Q6P9B9 1019 aaKnown RBP15.64■□□□□ 0.09
HACD3-201ENST00000261875 ABCF2Q9UG63 623 aa15.64■□□□□ 0.09
HACD3-201ENST00000261875 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
HACD3-201ENST00000261875 SHANK3Q9BYB0 1731 aa15.64■□□□□ 0.09
HACD3-201ENST00000261875 MIGA1Q8NAN2 632 aa15.64■□□□□ 0.09
HACD3-201ENST00000261875 F13A1P00488 732 aa15.63■□□□□ 0.09
HACD3-201ENST00000261875 BCAMP50895 628 aa15.63■□□□□ 0.09
HACD3-201ENST00000261875 OTUD7BQ6GQQ9 843 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms