RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 FAM107BQ9H098 131 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 JAK2O60674 1132 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 PPP2R3AQ06190 1150 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 MICU3Q86XE3 530 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 CWF19L2Q2TBE0 894 aaKnown RBP18.64■□□□□ 0.58
SREBF1-201ENST00000261646 CABP4P57796 275 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 RNF187Q5TA31 235 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-201ENST00000261646 LRRC8AQ8IWT6 810 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 SLC27A2O14975 620 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 MCM3P25205 808 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 MICALL1Q8N3F8 863 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
SREBF1-201ENST00000261646 SBNO2Q9Y2G9 1366 aa18.64■□□□□ 0.57
SREBF1-201ENST00000261646 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 CCDC175P0C221 793 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 RPS6KB1P23443 525 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 WASF1Q92558 559 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 MRVI1Q9Y6F6 885 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 A0A087WZG4 1122 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 NAA30Q147X3 362 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-201ENST00000261646 TTC31Q49AM3 519 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-201ENST00000261646 UBE3BQ7Z3V4 1068 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 RGS12O14924 1447 aa18.63■□□□□ 0.57
SREBF1-201ENST00000261646 OAS2P29728 719 aaKnown RBP18.63■□□□□ 0.57
SREBF1-201ENST00000261646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.63■□□□□ 0.573e-7■■□□□ 13.8
SREBF1-201ENST00000261646 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
SREBF1-201ENST00000261646 EPS15P42566 896 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 DNA2P51530 1060 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 MYO5CQ9NQX4 1742 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 N4BP3O15049 544 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
SREBF1-201ENST00000261646 YEATS4O95619 227 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 ZFYVE9O95405 1425 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 MATR3P43243 847 aaKnown RBP eCLIP18.61■□□□□ 0.57
SREBF1-201ENST00000261646 PTH1RQ03431 593 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 ZSCAN26Q16670 478 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 NACAP1Q9BZK3 213 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 XPO4Q9C0E2 1151 aaKnown RBP18.61■□□□□ 0.57
SREBF1-201ENST00000261646 TDO2P48775 406 aa18.61■□□□□ 0.57
SREBF1-201ENST00000261646 NCBP1Q09161 790 aaKnown RBP18.61■□□□□ 0.57
SREBF1-201ENST00000261646 BAG1Q99933 345 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-201ENST00000261646 FANCCQ00597 558 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 ZNF569Q5MCW4 686 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 CEP112Q8N8E3 955 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-201ENST00000261646 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 GRM8O00222 908 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 MYL5Q02045 173 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
SREBF1-201ENST00000261646 SYNMO15061 1565 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 NBPF7P0C2Y1 421 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-201ENST00000261646 CALRP27797 417 aaKnown RBP18.6■□□□□ 0.57
SREBF1-201ENST00000261646 SPA17Q15506 151 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
SREBF1-201ENST00000261646 TPCN1Q9ULQ1 816 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 TRPM2O94759 1503 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
SREBF1-201ENST00000261646 CTAGE9A4FU28 777 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 OTUD7BQ6GQQ9 843 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 AIDAQ96BJ3 306 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 AOX1Q06278 1338 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 SMC1AQ14683 1233 aaKnown RBP18.59■□□□□ 0.57
SREBF1-201ENST00000261646 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 JADE2Q9NQC1 790 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 POGZQ7Z3K3 1410 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 METAP2P50579 478 aaKnown RBP eCLIP18.59■□□□□ 0.572e-6■□□□□ 9
SREBF1-201ENST00000261646 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 TNRQ92752 1358 aa18.59■□□□□ 0.57
SREBF1-201ENST00000261646 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.57
SREBF1-201ENST00000261646 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.57
SREBF1-201ENST00000261646 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.57
SREBF1-201ENST00000261646 CYP2E1P05181 493 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-201ENST00000261646 AFMP43652 599 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 IMPACTQ9P2X3 320 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
SREBF1-201ENST00000261646 HDXQ7Z353 690 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 KLHDC4Q8TBB5 520 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 PLCD4Q9BRC7 762 aa18.58■□□□□ 0.56
SREBF1-201ENST00000261646 A0A087WWV3 80 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 PAFAH1B1P43034 410 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 ETF1P62495 437 aaKnown RBP18.57■□□□□ 0.56
SREBF1-201ENST00000261646 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 KCNA6P17658 529 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 STX17P56962 302 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 MRFAP1L1Q96HT8 127 aa18.57■□□□□ 0.56
SREBF1-201ENST00000261646 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms