RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 EDC4Q6P2E9 1401 aaKnown RBP21.79■■□□□ 1.08
PTPRE-201ENST00000254667 RNF113AO15541 343 aaKnown RBP21.78■■□□□ 1.08
PTPRE-201ENST00000254667 TDRD12Q587J7 1177 aaKnown RBP21.78■■□□□ 1.08
PTPRE-201ENST00000254667 TMCO3Q6UWJ1 677 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 CRACR2AQ9BSW2 395 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 ANKRD2Q9GZV1 360 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 RTCBQ9Y3I0 505 aaKnown RBP21.78■■□□□ 1.08
PTPRE-201ENST00000254667 ANKRD62A6NC57 917 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 PAFAH1B1P43034 410 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 C8orf37Q96NL8 207 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 DDX21Q9NR30 783 aaKnown RBP eCLIP21.78■■□□□ 1.08
PTPRE-201ENST00000254667 HOXB7P09629 217 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 EZRP15311 586 aaKnown RBP21.78■■□□□ 1.08
PTPRE-201ENST00000254667 TAX1BP1Q86VP1 789 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 ATP10AO60312 1499 aa21.78■■□□□ 1.08
PTPRE-201ENST00000254667 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.08
PTPRE-201ENST00000254667 SBNO1A3KN83 1393 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 CCDC102AQ96A19 550 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 SYKP43405 635 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 OGFOD1Q8N543 542 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 NMIQ13287 307 aaPredicted RBP21.77■■□□□ 1.08
PTPRE-201ENST00000254667 ADGRL2O95490 1459 aa21.77■■□□□ 1.08
PTPRE-201ENST00000254667 RTL9Q8NET4 1388 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 PHACTR3Q96KR7 559 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 BIN1O00499 593 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 ZBTB40Q9NUA8 1239 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 TSPYL6Q8N831 410 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 FAM193AP78312 1265 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 Q6ZUG5 572 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 RAB11FIP4Q86YS3 637 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 NECAB1Q8N987 351 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 ALS2CR12Q96Q35 445 aa21.76■■□□□ 1.07
PTPRE-201ENST00000254667 TBCAO75347 108 aaKnown RBP21.75■■□□□ 1.07
PTPRE-201ENST00000254667 URI1O94763 535 aaPredicted RBP21.75■■□□□ 1.07
PTPRE-201ENST00000254667 PA2G4Q9UQ80 394 aaKnown RBP21.75■■□□□ 1.07
PTPRE-201ENST00000254667 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PTPRE-201ENST00000254667 PZPP20742 1482 aa21.75■■□□□ 1.07
PTPRE-201ENST00000254667 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
PTPRE-201ENST00000254667 EXOC1Q9NV70 894 aa21.75■■□□□ 1.07
PTPRE-201ENST00000254667 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 TMC6Q7Z403 805 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 LUZP1Q86V48 1076 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 SMC5Q8IY18 1101 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 PRC1O43663 620 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 CWF19L2Q2TBE0 894 aaKnown RBP21.74■■□□□ 1.07
PTPRE-201ENST00000254667 TCERG1LQ5VWI1 586 aa21.74■■□□□ 1.07
PTPRE-201ENST00000254667 CPLX3Q8WVH0 158 aa21.73■■□□□ 1.07
PTPRE-201ENST00000254667 PANK2Q9BZ23 570 aa21.73■■□□□ 1.07
PTPRE-201ENST00000254667 SAMM50Q9Y512 469 aa21.73■■□□□ 1.07
PTPRE-201ENST00000254667 SYCP3Q8IZU3 236 aa21.73■■□□□ 1.07
PTPRE-201ENST00000254667 MRPS27Q92552 414 aaKnown RBP21.73■■□□□ 1.07
PTPRE-201ENST00000254667 CALML3P27482 149 aa21.73■■□□□ 1.07
PTPRE-201ENST00000254667 IQSEC3Q9UPP2 1182 aaPredicted RBP21.73■■□□□ 1.07
PTPRE-201ENST00000254667 SPAG1Q07617 926 aa21.72■■□□□ 1.07
PTPRE-201ENST00000254667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.72■■□□□ 1.07
PTPRE-201ENST00000254667 ZC3H12CQ9C0D7 883 aaKnown RBP21.72■■□□□ 1.07
PTPRE-201ENST00000254667 ADCY5O95622 1261 aa21.72■■□□□ 1.07
PTPRE-201ENST00000254667 PER1O15534 1290 aaPredicted RBP21.72■■□□□ 1.07
PTPRE-201ENST00000254667 CTAGE1Q96RT6 745 aa21.72■■□□□ 1.07
PTPRE-201ENST00000254667 EYA3Q99504 573 aa21.72■■□□□ 1.07
PTPRE-201ENST00000254667 CHMP4BP1P59074 171 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 POTEB2H3BUK9 544 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 CCDC172P0C7W6 258 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 TRIM47Q96LD4 638 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 DISP1Q96F81 1524 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 SLC4A8Q2Y0W8 1093 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 NAA15Q9BXJ9 866 aaKnown RBP21.71■■□□□ 1.07
PTPRE-201ENST00000254667 LRRC2Q9BYS8 371 aa21.71■■□□□ 1.07
PTPRE-201ENST00000254667 TFCP2Q12800 502 aa21.7■■□□□ 1.07
PTPRE-201ENST00000254667 PARP10Q53GL7 1025 aa21.7■■□□□ 1.07
PTPRE-201ENST00000254667 C6orf50Q9HD87 102 aa21.7■■□□□ 1.07
PTPRE-201ENST00000254667 TNNT1P13805 278 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 USP37Q86T82 979 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 C16orf71Q8IYS4 520 aaPredicted RBP21.7■■□□□ 1.06
PTPRE-201ENST00000254667 LRSAM1Q6UWE0 723 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 PLBD2Q8NHP8 589 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 F13A1P00488 732 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 STAT6P42226 847 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 HEATR3Q7Z4Q2 680 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 GTPBP4Q9BZE4 634 aaKnown RBP21.7■■□□□ 1.06
PTPRE-201ENST00000254667 PARP3Q9Y6F1 533 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 IL13P35225 146 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 EHBP1Q8NDI1 1231 aa21.7■■□□□ 1.06
PTPRE-201ENST00000254667 N4BP3O15049 544 aa21.69■■□□□ 1.06
PTPRE-201ENST00000254667 IBSPP21815 317 aaPredicted RBP21.69■■□□□ 1.06
PTPRE-201ENST00000254667 NAPAP54920 295 aa21.69■■□□□ 1.06
PTPRE-201ENST00000254667 ZSCAN23Q3MJ62 389 aa21.69■■□□□ 1.06
PTPRE-201ENST00000254667 CCDC171Q6TFL3 1326 aa21.69■■□□□ 1.06
PTPRE-201ENST00000254667 RLBP1P12271 317 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 HELLSQ9NRZ9 838 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPRE-201ENST00000254667 CREB3L3Q68CJ9 461 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 ZNF790Q6PG37 636 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 PLEKHM2Q8IWE5 1019 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 TCEANC2Q96MN5 208 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 TRIM75PA6NK02 468 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 CCDC174Q6PII3 467 aa21.68■■□□□ 1.06
PTPRE-201ENST00000254667 DHX32Q7L7V1 743 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms