RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 COL22A1Q8NFW1 1626 aaPredicted RBP25.85■■□□□ 1.73
CLN6-201ENST00000249806 F13A1P00488 732 aa25.85■■□□□ 1.73
CLN6-201ENST00000249806 FKBP4Q02790 459 aaKnown RBP eCLIP25.85■■□□□ 1.73
CLN6-201ENST00000249806 XAGE2Q96GT9 111 aa25.85■■□□□ 1.73
CLN6-201ENST00000249806 NEK1Q96PY6 1258 aa25.85■■□□□ 1.73
CLN6-201ENST00000249806 CNPY2Q9Y2B0 182 aa25.85■■□□□ 1.73
CLN6-201ENST00000249806 A0A0G2JS52 829 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 ANKRD1Q15327 319 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 TTLL11Q8NHH1 800 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 ALDH8A1Q9H2A2 487 aaPredicted RBP25.84■■□□□ 1.73
CLN6-201ENST00000249806 GREM2Q9H772 168 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 HELLSQ9NRZ9 838 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 PLCH1Q4KWH8 1693 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 KRT32Q14532 448 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 FBXO3Q9UK99 471 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 MTMR6Q9Y217 621 aa25.84■■□□□ 1.73
CLN6-201ENST00000249806 LRP6O75581 1613 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 NASPP49321 788 aaPredicted RBP25.83■■□□□ 1.73
CLN6-201ENST00000249806 ZMYM1Q5SVZ6 1142 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 GORABQ5T7V8 394 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 FAM43AQ8N2R8 423 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 AKAP2Q9Y2D5 859 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 CDHR2Q9BYE9 1310 aa25.83■■□□□ 1.73
CLN6-201ENST00000249806 SYCE3A1L190 88 aa25.83■■□□□ 1.72
CLN6-201ENST00000249806 ITGA6P23229 1130 aa25.83■■□□□ 1.72
CLN6-201ENST00000249806 HSP90AB3PQ58FF7 597 aa25.83■■□□□ 1.72
CLN6-201ENST00000249806 CCDC158Q5M9N0 1113 aa25.83■■□□□ 1.72
CLN6-201ENST00000249806 TRMT112Q9UI30 125 aaKnown RBP25.83■■□□□ 1.72
CLN6-201ENST00000249806 STK3Q13188 491 aa25.82■■□□□ 1.72
CLN6-201ENST00000249806 DZIP3Q86Y13 1208 aaKnown RBP25.82■■□□□ 1.72
CLN6-201ENST00000249806 TTC39AQ5SRH9 613 aa25.82■■□□□ 1.72
CLN6-201ENST00000249806 ACSBG1Q96GR2 724 aa25.82■■□□□ 1.72
CLN6-201ENST00000249806 NUP98P52948 1817 aa25.81■■□□□ 1.72
CLN6-201ENST00000249806 IRS4O14654 1257 aaPredicted RBP25.81■■□□□ 1.72
CLN6-201ENST00000249806 RNF113AO15541 343 aaKnown RBP25.81■■□□□ 1.72
CLN6-201ENST00000249806 SCARF1Q14162 830 aa25.81■■□□□ 1.72
CLN6-201ENST00000249806 LDHAL6AQ6ZMR3 332 aa25.81■■□□□ 1.72
CLN6-201ENST00000249806 RBSNQ9H1K0 784 aa25.81■■□□□ 1.72
CLN6-201ENST00000249806 SPATA31A1Q5TZJ5 1347 aa25.81■■□□□ 1.72
CLN6-201ENST00000249806 DDB1Q16531 1140 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 STOX1Q6ZVD7 989 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.8■■□□□ 1.72
CLN6-201ENST00000249806 RIPOR2Q9Y4F9 1068 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 DOT1LQ8TEK3 1739 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 VPS37CA5D8V6 355 aaPredicted RBP25.8■■□□□ 1.72
CLN6-201ENST00000249806 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
CLN6-201ENST00000249806 CTSWP56202 376 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 MAST3O60307 1309 aa25.8■■□□□ 1.72
CLN6-201ENST00000249806 WNK3Q9BYP7 1800 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 A0A0G2JLW4 131 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 HSPD1P10809 573 aaKnown RBP25.79■■□□□ 1.72
CLN6-201ENST00000249806 TPRNQ4KMQ1 711 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 LARP1BQ659C4 914 aaKnown RBP25.79■■□□□ 1.72
CLN6-201ENST00000249806 Q6ZUG5 572 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 METTL24Q5JXM2 366 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 LRRC2Q9BYS8 371 aa25.79■■□□□ 1.72
CLN6-201ENST00000249806 UBN2Q6ZU65 1347 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 LRSAM1Q6UWE0 723 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 TMEM87AQ8NBN3 555 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 DSCC1Q9BVC3 393 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 RRAGDQ9NQL2 400 aaPredicted RBP25.78■■□□□ 1.72
CLN6-201ENST00000249806 ANKRD36CQ5JPF3 1778 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 NUTM2BA6NNL0 878 aaPredicted RBP25.78■■□□□ 1.72
CLN6-201ENST00000249806 NUTM2EB1AL46 878 aaPredicted RBP25.78■■□□□ 1.72
CLN6-201ENST00000249806 M0R2C6 588 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 PI16Q6UXB8 463 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 NUTM2AQ8IVF1 878 aaPredicted RBP25.78■■□□□ 1.72
CLN6-201ENST00000249806 OSBP2Q969R2 916 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 ATP6V1DQ9Y5K8 247 aa25.78■■□□□ 1.72
CLN6-201ENST00000249806 ERVV-1B6SEH8 477 aa25.77■■□□□ 1.72
CLN6-201ENST00000249806 DNM1Q05193 864 aaKnown RBP25.77■■□□□ 1.72
CLN6-201ENST00000249806 RIC1Q4ADV7 1423 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 ANKRD18BA2A2Z9 1011 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 FIBPO43427 364 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 TICAM2Q86XR7 235 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 CNNM1Q9NRU3 951 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 ZAP70P43403 619 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 ATP2B3Q16720 1220 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
CLN6-201ENST00000249806 CDCA7Q9BWT1 371 aaPredicted RBP25.76■■□□□ 1.71
CLN6-201ENST00000249806 MYH3P11055 1940 aa25.76■■□□□ 1.71
CLN6-201ENST00000249806 INTS5Q6P9B9 1019 aaKnown RBP25.75■■□□□ 1.71
CLN6-201ENST00000249806 ZNF34Q8IZ26 560 aa25.75■■□□□ 1.71
CLN6-201ENST00000249806 SPEF2Q9C093 1822 aa25.75■■□□□ 1.71
CLN6-201ENST00000249806 PDE8AO60658 829 aa25.75■■□□□ 1.71
CLN6-201ENST00000249806 ATP6V1AP38606 617 aa25.75■■□□□ 1.71
CLN6-201ENST00000249806 LAMA4Q16363 1823 aa25.74■■□□□ 1.71
CLN6-201ENST00000249806 EIF5P55010 431 aaKnown RBP25.74■■□□□ 1.71
CLN6-201ENST00000249806 CDC37L1Q7L3B6 337 aa25.74■■□□□ 1.71
CLN6-201ENST00000249806 FERMT3Q86UX7 667 aa25.73■■□□□ 1.71
CLN6-201ENST00000249806 BRF1Q92994 677 aa25.73■■□□□ 1.71
CLN6-201ENST00000249806 THRAP3Q9Y2W1 955 aaKnown RBP25.73■■□□□ 1.71
CLN6-201ENST00000249806 WASHC4Q2M389 1173 aa25.73■■□□□ 1.71
CLN6-201ENST00000249806 TTLL5Q6EMB2 1281 aa25.73■■□□□ 1.71
CLN6-201ENST00000249806 FAM177BA6PVY3 158 aa25.72■■□□□ 1.71
CLN6-201ENST00000249806 HSP90B1P14625 803 aaKnown RBP25.72■■□□□ 1.71
CLN6-201ENST00000249806 GTF3C6Q969F1 213 aa25.72■■□□□ 1.71
CLN6-201ENST00000249806 CRKLP46109 303 aaKnown RBP25.72■■□□□ 1.71
CLN6-201ENST00000249806 FGD1P98174 961 aa25.72■■□□□ 1.71
CLN6-201ENST00000249806 DHX32Q7L7V1 743 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms