RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 PNMA6AP0CW24 399 aaPredicted RBP16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 CASQ1P31415 396 aa16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 CCAR2Q8N163 923 aaKnown RBP16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
PCDHB3-201ENST00000231130 SASH1O94885 1247 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 TMC6Q7Z403 805 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 BICC1Q9H694 974 aaKnown RBP16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 ELP1O95163 1332 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 GOLPH3LQ9H4A5 285 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 ANKRD65E5RJM6 399 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 MYL6BP14649 208 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 E2F4Q16254 413 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
PCDHB3-201ENST00000231130 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 CFAP45Q9UL16 551 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 IGSF1Q8N6C5 1336 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 HOXC9P31274 260 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 IQCB1Q15051 598 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 STX1AQ16623 288 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 ICE2Q659A1 982 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 CEP170BQ9Y4F5 1589 aaPredicted RBP16.48■□□□□ 0.23
PCDHB3-201ENST00000231130 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 HSP90AA4PQ58FG1 418 aa16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 DIP2CQ9Y2E4 1556 aa16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 A2ML1A8K2U0 1454 aa16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
PCDHB3-201ENST00000231130 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 PLA2G4AP47712 749 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 RESTQ13127 1097 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 DEF6Q9H4E7 631 aa16.46■□□□□ 0.23
PCDHB3-201ENST00000231130 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.22
PCDHB3-201ENST00000231130 SCRN1Q12765 414 aa16.46■□□□□ 0.22
PCDHB3-201ENST00000231130 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.22
PCDHB3-201ENST00000231130 AK7Q96M32 723 aa16.46■□□□□ 0.22
PCDHB3-201ENST00000231130 EPC1Q9H2F5 836 aa16.46■□□□□ 0.22
PCDHB3-201ENST00000231130 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 SBNO1A3KN83 1393 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 LMOD1P29536 600 aaPredicted RBP16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 CCZ1BP86790 482 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 CCZ1P86791 482 aaPredicted RBP16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 CREBRFQ8IUR6 639 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 USP6P35125 1406 aa16.45■□□□□ 0.22
PCDHB3-201ENST00000231130 MYCBPQ99417 103 aaPredicted RBP16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 ANO10Q9NW15 660 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 DNAI1Q9UI46 699 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 HIP1O00291 1037 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 TAF5LO75529 589 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 URI1O94763 535 aaPredicted RBP16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 XPO4Q9C0E2 1151 aaKnown RBP16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 JRKLQ9Y4A0 524 aa16.44■□□□□ 0.22
PCDHB3-201ENST00000231130 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 TTC31Q49AM3 519 aaPredicted RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 LEKR1Q6ZMV7 388 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 GEMIN8Q9NWZ8 242 aaKnown RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 CYP21A2P08686 494 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 NOP2P46087 812 aaKnown RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 BANK1Q8NDB2 785 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 GJB4Q9NTQ9 266 aa16.43■□□□□ 0.22
PCDHB3-201ENST00000231130 DPCR1Q3MIW9 517 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms